Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00009437 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 37889502 ~ 37908968 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00009437 | True | 639 | mRNA | 0.62 | 6 | 37889502 | 37908968 |
| TU71208 | False | 547 | lncRNA | 0.48 | 2 | 37906405 | 37907571 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009435 | NA | coding | downstream | 24264 | 37859097 ~ 37865238 (-) |
| AMCG00009436 | LOC105023059 | coding | downstream | 86655 | 37772580 ~ 37802847 (-) |
| AMCG00009434 | NA | coding | downstream | 150430 | 37716157 ~ 37739072 (-) |
| AMCG00009431 | LOC108427717 | coding | downstream | 207664 | 37673133 ~ 37681838 (-) |
| AMCG00009432 | NA | coding | downstream | 227439 | 37638539 ~ 37662063 (-) |
| AMCG00009440 | phb2,LOC107591156,LOC107692360 | coding | upstream | 19338 | 37928306 ~ 37933645 (-) |
| AMCG00009439 | pde6d | coding | upstream | 33103 | 37942071 ~ 37954055 (-) |
| AMCG00009441 | usp13,LOC107659032 | coding | upstream | 154858 | 38063826 ~ 38088124 (-) |
| AMCG00009447 | NA | coding | upstream | 180388 | 38089356 ~ 38092156 (-) |
| AMCG00009448 | actl6a,LOC107709208 | coding | upstream | 186005 | 38094973 ~ 38105793 (-) |
| G56927 | NA | non-coding | downstream | 155314 | 37636705 ~ 37734188 (-) |
| G56861 | NA | non-coding | downstream | 371848 | 37515969 ~ 37517654 (-) |
| G56831 | LOC106583953,LOC106560594 | non-coding | downstream | 466981 | 37418414 ~ 37422521 (-) |
| G56818 | tsc22d2,LOC105899227 | non-coding | downstream | 521833 | 37300544 ~ 37367669 (-) |
| G56795 | NA | non-coding | downstream | 621671 | 37201032 ~ 37267831 (-) |
| G57013 | NA | non-coding | upstream | 209460 | 38118428 ~ 38118843 (-) |
| G57015 | NA | non-coding | upstream | 216181 | 38125149 ~ 38125363 (-) |
| G57016 | NA | non-coding | upstream | 217013 | 38125981 ~ 38127340 (-) |
| G57017 | NA | non-coding | upstream | 218500 | 38127468 ~ 38127678 (-) |
| G57018 | LOC107653516,LOC107558362,LOC107706720,LOC107564248,LOC107705311,LOC107550449 | non-coding | upstream | 220016 | 38128984 ~ 38129202 (-) |
| AMCG00009417 | NA | other | downstream | 413467 | 37467254 ~ 37476035 (-) |
| AMCG00009408 | NA | other | downstream | 494514 | 37285576 ~ 37394988 (-) |
| AMCG00009409 | selenot,LOC107681817,LOC106599070,LOC107708642 | other | downstream | 604137 | 37280548 ~ 37285365 (-) |
| G56800 | NA | other | downstream | 669426 | 37215960 ~ 37220076 (-) |
| G56568 | NA | other | downstream | 2016905 | 35872123 ~ 35872597 (-) |
| G57155 | dner | other | upstream | 671317 | 38580285 ~ 38582820 (-) |
| AMCG00009472 | NA | other | upstream | 918997 | 38827965 ~ 38837594 (-) |
| AMCG00009521 | gigyf2,LOC107728389 | other | upstream | 2212495 | 40121463 ~ 40157471 (-) |
| AMCG00009571 | LOC107087052,LOC105890629 | other | upstream | 3905591 | 41814559 ~ 41826934 (-) |
| AMCG00009582 | NA | other | upstream | 4132231 | 42041199 ~ 42056128 (-) |
