Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00009444 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 38092400 ~ 38094123 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005761 | mitochondrial ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K17428 | MRPL47, NCM1; large subunit ribosomal protein L47 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00009444 | True | 570 | mRNA | 0.52 | 5 | 38092400 | 38094123 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009438 | NA | coding | upstream | 33127 | 38031385 ~ 38059273 (+) |
| AMCG00009427 | NA | coding | upstream | 471010 | 37619502 ~ 37621390 (+) |
| AMCG00009419 | NA | coding | upstream | 570947 | 37520323 ~ 37521453 (+) |
| AMCG00009421 | NA | coding | upstream | 575920 | 37505763 ~ 37516480 (+) |
| AMCG00009418 | NA | coding | upstream | 593214 | 37495000 ~ 37499186 (+) |
| AMCG00009443 | gnb4,LOC108270972 | coding | downstream | 31185 | 38125308 ~ 38129404 (+) |
| AMCG00009442 | NA | coding | downstream | 53852 | 38147975 ~ 38150946 (+) |
| AMCG00009449 | NA | coding | downstream | 100724 | 38194847 ~ 38206084 (+) |
| AMCG00009450 | NA | coding | downstream | 112861 | 38206984 ~ 38241384 (+) |
| AMCG00009457 | NA | coding | downstream | 239925 | 38334048 ~ 38354970 (+) |
| G56982 | NA | non-coding | upstream | 24247 | 38063790 ~ 38068153 (+) |
| G56775 | NA | non-coding | upstream | 800735 | 37285843 ~ 37291665 (+) |
| G56754 | NA | non-coding | upstream | 897312 | 37193726 ~ 37195088 (+) |
| G56747 | NA | non-coding | upstream | 903622 | 37188568 ~ 37188778 (+) |
| G56712 | NA | non-coding | upstream | 1062858 | 37029206 ~ 37029542 (+) |
| G56995 | NA | non-coding | downstream | 35959 | 38130082 ~ 38133966 (+) |
| G57036 | NA | non-coding | downstream | 108671 | 38202794 ~ 38280479 (+) |
| G57161 | NA | non-coding | downstream | 533796 | 38627919 ~ 38628135 (+) |
| G57164 | NA | non-coding | downstream | 538974 | 38633097 ~ 38633351 (+) |
| G57175 | NA | non-coding | downstream | 663257 | 38757380 ~ 38834945 (+) |
| AMCG00009428 | NA | other | upstream | 475704 | 37608305 ~ 37616696 (+) |
| AMCG00009429 | NA | other | upstream | 487276 | 37530822 ~ 37605124 (+) |
| AMCG00009415 | wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 | other | upstream | 628895 | 37422017 ~ 37463505 (+) |
| AMCG00009405 | pfn2,LOC105899220,LOC106598797,LOC105028925 | other | upstream | 724729 | 37348108 ~ 37367671 (+) |
| AMCG00009404 | NA | other | upstream | 795391 | 37293903 ~ 37297009 (+) |
| G57105 | NA | other | downstream | 348132 | 38442255 ~ 38457592 (+) |
| AMCG00009480 | sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 | other | downstream | 1340777 | 39434900 ~ 39437017 (+) |
| G57430 | NA | other | downstream | 1853883 | 39948006 ~ 39949200 (+) |
| AMCG00009516 | NA | other | downstream | 1992351 | 40086474 ~ 40105052 (+) |
| G57604 | NA | other | downstream | 2896679 | 40990802 ~ 40994659 (+) |
