AMCG00009454


Basic Information

Item Value
gene id AMCG00009454
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 38290897 ~ 38297834 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009454
ATGGCTACAGATGATTCaatATTTGGAGAAGAAGGAGTGAGAGGACTGCTGAATGCACTTGAAGGAAACAATCACGTTGTTTCACTGAGTTTATGTTACTGCAAACTGGGCCCAGGCAGTGGATCCCTATTGGCTGCACTTGTCATCAAAAGTGCAATAAGAGACCTGTATGTCAATGGGAATGAACTGCAGAGTGAGGGGGCCATAGCTTTGGTCACTGAGATGGCTGAATATGCAGAAAACATGGCTTCCGCTAAACAGTCGCAGCATGTGGAAGAGCTGGGCAGGCAGAGTTATAGCGCCCCTTCAAGGCTTGAAACAAGAACAGGATCTgcaatgaagaagaagaaaaagaaaaaagGAAAGAAGAGGAAAATAGCAAAGCCTCCTGAAATTGGCCCCTGGCTAGAAAAATTGCACCTTGCTGACAATGCAATTGACGGCTGTGGAAAGGCTGGCATTACAAGTCCACTGAAGTTCACCCACGTTCTCTGTCAGCTTATTAGGTTTTCGGATCACTTGACAGAGCTCGATTTAGATGATAACGGCATTGGCGAACTTTGTGGCAAACTTGTCCTGGATGCACTAAAGGAGAGAAAAGAAGCTAAACTGGCATGCTTGAAGGTCAAAGTGACATCCCAGATGAGTGCAGACACCTTCGCTAGTATCCTGAAGAACACTAAGAAGCTTGCATctaagaaaaagagaaagaag

Function

GO:

id name namespace
GO:0005540 hyaluronic acid binding molecular_function
GO:0031406 carboxylic acid binding molecular_function
GO:0043177 organic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009454 True 714 mRNA 0.45 7 38290897 38297834

Neighbor

gene id symbol gene type direction distance location
AMCG00009453 rnf7 coding downstream 9367 38279251 ~ 38281530 (-)
AMCG00009452 NA coding downstream 19187 38266199 ~ 38271710 (-)
AMCG00009451 NA coding downstream 31081 38243207 ~ 38259816 (-)
AMCG00009445 pik3ca,LOC107574159 coding downstream 114373 38155725 ~ 38176524 (-)
AMCG00009446 NA coding downstream 143950 38134083 ~ 38146947 (-)
AMCG00009455 NA coding upstream 20136 38317970 ~ 38319433 (-)
AMCG00009458 NA coding upstream 60086 38357920 ~ 38367533 (-)
AMCG00009460 NA coding upstream 80978 38378812 ~ 38414321 (-)
AMCG00009461 NA coding upstream 134741 38432575 ~ 38436609 (-)
AMCG00009459 NA coding upstream 176350 38474184 ~ 38481035 (-)
G57011 NA non-coding downstream 156931 38129295 ~ 38133966 (-)
G57018 LOC107653516,LOC107558362,LOC107706720,LOC107564248,LOC107705311,LOC107550449 non-coding downstream 161695 38128984 ~ 38129202 (-)
G57017 NA non-coding downstream 163219 38127468 ~ 38127678 (-)
G57016 NA non-coding downstream 163557 38125981 ~ 38127340 (-)
G57015 NA non-coding downstream 165534 38125149 ~ 38125363 (-)
G57143 LOC102787183,LOC106580884 non-coding upstream 203284 38501118 ~ 38503129 (-)
G57165 NA non-coding upstream 335278 38633112 ~ 38633397 (-)
G57194 NA non-coding upstream 474592 38772426 ~ 38773951 (-)
G57244 NA non-coding upstream 783587 39081421 ~ 39083424 (-)
G57351 NA non-coding upstream 1282777 39580611 ~ 39588074 (-)
AMCG00009437 NA other downstream 381929 37889502 ~ 37908968 (-)
AMCG00009417 NA other downstream 814862 37467254 ~ 37476035 (-)
AMCG00009408 NA other downstream 895909 37285576 ~ 37394988 (-)
AMCG00009409 selenot,LOC107681817,LOC106599070,LOC107708642 other downstream 1005532 37280548 ~ 37285365 (-)
G56800 NA other downstream 1070821 37215960 ~ 37220076 (-)
G57155 dner other upstream 282451 38580285 ~ 38582820 (-)
AMCG00009472 NA other upstream 530131 38827965 ~ 38837594 (-)
AMCG00009521 gigyf2,LOC107728389 other upstream 1823629 40121463 ~ 40157471 (-)
AMCG00009571 LOC107087052,LOC105890629 other upstream 3516725 41814559 ~ 41826934 (-)
AMCG00009582 NA other upstream 3743365 42041199 ~ 42056128 (-)

Expression


Co-expression Network