Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00009455 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 38317970 ~ 38319433 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0021591 | ventricular system development | biological_process |
| GO:0021592 | fourth ventricle development | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00009455 | True | 326 | mRNA | 0.42 | 2 | 38317970 | 38319433 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009454 | NA | coding | downstream | 20136 | 38290897 ~ 38297834 (-) |
| AMCG00009453 | rnf7 | coding | downstream | 36440 | 38279251 ~ 38281530 (-) |
| AMCG00009452 | NA | coding | downstream | 46260 | 38266199 ~ 38271710 (-) |
| AMCG00009451 | NA | coding | downstream | 58154 | 38243207 ~ 38259816 (-) |
| AMCG00009445 | pik3ca,LOC107574159 | coding | downstream | 141446 | 38155725 ~ 38176524 (-) |
| AMCG00009458 | NA | coding | upstream | 38487 | 38357920 ~ 38367533 (-) |
| AMCG00009460 | NA | coding | upstream | 59379 | 38378812 ~ 38414321 (-) |
| AMCG00009461 | NA | coding | upstream | 113142 | 38432575 ~ 38436609 (-) |
| AMCG00009459 | NA | coding | upstream | 154751 | 38474184 ~ 38481035 (-) |
| AMCG00009467 | daw1 | coding | upstream | 435417 | 38754850 ~ 38762930 (-) |
| G57011 | NA | non-coding | downstream | 184004 | 38129295 ~ 38133966 (-) |
| G57018 | LOC107653516,LOC107558362,LOC107706720,LOC107564248,LOC107705311,LOC107550449 | non-coding | downstream | 188768 | 38128984 ~ 38129202 (-) |
| G57017 | NA | non-coding | downstream | 190292 | 38127468 ~ 38127678 (-) |
| G57016 | NA | non-coding | downstream | 190630 | 38125981 ~ 38127340 (-) |
| G57015 | NA | non-coding | downstream | 192607 | 38125149 ~ 38125363 (-) |
| G57143 | LOC102787183,LOC106580884 | non-coding | upstream | 181685 | 38501118 ~ 38503129 (-) |
| G57165 | NA | non-coding | upstream | 313679 | 38633112 ~ 38633397 (-) |
| G57194 | NA | non-coding | upstream | 452993 | 38772426 ~ 38773951 (-) |
| G57244 | NA | non-coding | upstream | 761988 | 39081421 ~ 39083424 (-) |
| G57351 | NA | non-coding | upstream | 1261178 | 39580611 ~ 39588074 (-) |
| AMCG00009437 | NA | other | downstream | 409002 | 37889502 ~ 37908968 (-) |
| AMCG00009417 | NA | other | downstream | 841935 | 37467254 ~ 37476035 (-) |
| AMCG00009408 | NA | other | downstream | 922982 | 37285576 ~ 37394988 (-) |
| AMCG00009409 | selenot,LOC107681817,LOC106599070,LOC107708642 | other | downstream | 1032605 | 37280548 ~ 37285365 (-) |
| G56800 | NA | other | downstream | 1097894 | 37215960 ~ 37220076 (-) |
| G57155 | dner | other | upstream | 260852 | 38580285 ~ 38582820 (-) |
| AMCG00009472 | NA | other | upstream | 508532 | 38827965 ~ 38837594 (-) |
| AMCG00009521 | gigyf2,LOC107728389 | other | upstream | 1802030 | 40121463 ~ 40157471 (-) |
| AMCG00009571 | LOC107087052,LOC105890629 | other | upstream | 3495126 | 41814559 ~ 41826934 (-) |
| AMCG00009582 | NA | other | upstream | 3721766 | 42041199 ~ 42056128 (-) |
