AMCG00009459


Basic Information

Item Value
gene id AMCG00009459
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 38474184 ~ 38481035 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009459
TGAGGAGCGAAATGTGTCGGATTGCCATTTTTATGCCACGTCATAGTTTATTGTTACACGATATATCAAGAAAAACGGATATCGTTGATGTTAATCCCCGACTGTATTAATTTTTGTCTTGGTAATCCACGCTCGAATTTCGGAAAAAATACCGCTCCGCGGGGTCATGACCCTATAATCTTAACAACTGTTTACCCGattatttgctttttgtgtattttttataccTCGGTTGTGGGATACATTTAGATTATTCCTACATTCACAAACGGTGTGACGTTTCCCCGTAAAACCGTGCCCgctatttataattattttattttattattgtggaAAGAGTAGTCCGTTGTCCCGTCCGCTGTCATGGTAACTGCAAAGCGTCCCAAAATGGCGGCGCTGCTGGAGGAGCCCGTTTTTGAAATCAGTGGCCAGGGCCCTGCGCCCTCCAAAGACTTCTTCCAGTTGCTTGTGACAAAGACTAAAGTGATCTGGAGGTGGTGGAAAATCTCTCTCCGAAGTGAATTTCGGAACACAGTGCCGGGGGAACTTAAAGAATCGCACCAAGATTTTGTAGATGATTCCAGTCTTCAGGACGTGGCACGGCTTGCCCAGACATCACAGAAATTTAAAAAGCTGTGTAACTCAGAGGAGGTTTGGGAGCAGATCGTGGAGAGGCACTGTGACACAGTTACTCCAGAGATGAGGTCTTTGGCCAAAGAGAGGGGCTGGAAGGAGATTTTCTTCTGCAACAAACTGCAGCTTCAGATGCACATCAGTAGAAAAAGGCTAATGCAGGATCATGACAATGCACCCGAGGAACGAATCTGACTACATTAACCTTATATGAGCTGTATTCTTGTCTCAAACCATAAAcgtaaatcagttttttttttttttttaccatgacaaaattaacattttacagtttcGACATGTTCTGTTCCGTGAAATAAATTTGGGATGTGAAAGTATTGCAATGTTTACCTTATCTTCTCTATCTCCAACCACTTTCAATCTACTGGTAAGCTGTTCAAACTAACTTGGCCACCCAATCCCATATTCATGCAATCGTACATGATCTGAGTTCTGCgttatatatgtgtatctgtTCTGAGGTTTGCAGTGTATGTGTCATCGCATCTCTTTAAGAATAAATTCAAAGAATGACGAAAAACGACTCTTCTGAAGAATCGAACTTTTACAAtgcagttacattttcaaaagaccGTAAGCTGAATGTTTTAGTAGCTGTGATTAATTTTGTCTTCAAAAATGTCTATGAATGCGGTACAAATAGGTCGTTAATgaagatgtgtttgttttagggaAAGAATTCACACAGTATTAACTTTTCAATGAGTTTCACACAATGACAGAACTGCCATATTTCGTTATTCGTGGATGCATTTTACCTATGCACTATTTCATGTTCTTGCATAACATTGTGtgtaagttttgttttctttataaagaTACTATTAACAGTGCCTCAAATGGGTGCCTACACTTATAGTTATAGTACGATGCACAAACCTTATCTCAGCCTTATTTTCTGTTCAATCCTCCTTTAATTAGTAGCCACTGTCATTTCTcaatacagatttttaaaaatgc

Function

GO: NA

KEGG:

id description
K10312 FBXO36; F-box protein 36

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009459 True 1614 mRNA 0.39 4 38474184 38481035

Neighbor

gene id symbol gene type direction distance location
AMCG00009461 NA coding downstream 37575 38432575 ~ 38436609 (-)
AMCG00009460 NA coding downstream 59863 38378812 ~ 38414321 (-)
AMCG00009458 NA coding downstream 106651 38357920 ~ 38367533 (-)
AMCG00009455 NA coding downstream 154751 38317970 ~ 38319433 (-)
AMCG00009454 NA coding downstream 176350 38290897 ~ 38297834 (-)
AMCG00009467 daw1 coding upstream 273815 38754850 ~ 38762930 (-)
AMCG00009471 NA coding upstream 294523 38775558 ~ 38810559 (-)
AMCG00009470 NA coding upstream 336160 38817195 ~ 38820080 (-)
AMCG00009475 NA coding upstream 427987 38909022 ~ 38935195 (-)
AMCG00009476 NA coding upstream 531807 39012842 ~ 39013371 (-)
G57011 NA non-coding downstream 340218 38129295 ~ 38133966 (-)
G57018 LOC107653516,LOC107558362,LOC107706720,LOC107564248,LOC107705311,LOC107550449 non-coding downstream 344982 38128984 ~ 38129202 (-)
G57017 NA non-coding downstream 346506 38127468 ~ 38127678 (-)
G57016 NA non-coding downstream 346844 38125981 ~ 38127340 (-)
G57015 NA non-coding downstream 348821 38125149 ~ 38125363 (-)
G57143 LOC102787183,LOC106580884 non-coding upstream 20083 38501118 ~ 38503129 (-)
G57165 NA non-coding upstream 152077 38633112 ~ 38633397 (-)
G57194 NA non-coding upstream 291391 38772426 ~ 38773951 (-)
G57244 NA non-coding upstream 600386 39081421 ~ 39083424 (-)
G57351 NA non-coding upstream 1099576 39580611 ~ 39588074 (-)
AMCG00009437 NA other downstream 565216 37889502 ~ 37908968 (-)
AMCG00009417 NA other downstream 998149 37467254 ~ 37476035 (-)
AMCG00009408 NA other downstream 1079196 37285576 ~ 37394988 (-)
AMCG00009409 selenot,LOC107681817,LOC106599070,LOC107708642 other downstream 1188819 37280548 ~ 37285365 (-)
G56800 NA other downstream 1254108 37215960 ~ 37220076 (-)
G57155 dner other upstream 99250 38580285 ~ 38582820 (-)
AMCG00009472 NA other upstream 346930 38827965 ~ 38837594 (-)
AMCG00009521 gigyf2,LOC107728389 other upstream 1640428 40121463 ~ 40157471 (-)
AMCG00009571 LOC107087052,LOC105890629 other upstream 3333524 41814559 ~ 41826934 (-)
AMCG00009582 NA other upstream 3560164 42041199 ~ 42056128 (-)

Expression


Co-expression Network