AMCG00009460


Basic Information

Item Value
gene id AMCG00009460
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 38378812 ~ 38414321 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009460
GTGAAGCGAAAAACCTAGTTCCATGCCCTGGACCGAACCGGATGAGAGACTGTTTCTGCACAGTAAGCCTTGACCAAGAAGAAGTCTTCCGtacaaaagtatttgaaaaaagTTTAAGccCCTTTTACGGAGAGGACTTTTACTTTGAAATTCCACGACCTTTTCAGTATTTATCTTTCTATGTATATGCGAAGAGTGTTTTTCAAAGGGATTTACCAGTAGgGAAGGTAGCAATAAGAAAAGATGATCTGTGCAAATTCAGTGGGAAAGAACACTGGTTTAGTTTACAGCCTGTGGACCCCAACTCTGAAGTACAGGGCAAGGTTCACCTGGAGATGAAGTTGAATGAATTGATCACGGATAACGGGTCTGTTTGCCAGCAGCTCGTGGTCCGaatAATTGAATGCCAGGGATTGCCTCTTGTAAACGGGCAGAGCTGTGACGCATATGCAACCGTTTCTCTGATTGGACCGGCAAGGTCAGACCAGAAGAAAACCAAGGTGAAGAAGAAAACCAGTAACCCCCAGTTTGAGGAAACATTCTATTTTGAGGTTACAAGATCCAGTAGTTacacaaaaaaatcacagtttcaagtagaagaagaagacatTGAAAAGCTTGAAATCAAAGTGGATCTGTGGAACAATGGGAACCTGGTGCAGGACGTTTTCCTCGGGGAGACGCGGGTGTCTGTGAAGATTTTACGAAACGACTCGTCCCATCGAGCTTGGTATTTGTTACAACCGAAGGACAATGGCAACAAGACCTCTAAAACCGATGACCTTGGGTCTTTGAGATTAAATGTAACGTACACAGAGGATAACGTCCTCCCATCGATTTACTACATTTCCCTGAGGGATCTGCTGCTCAAATCGCCAGACGTTAAGCCTATTTCTGCCTCTGCTGCTCACATCCTGGGTGACATCTGTCGAGAGAGATACGAGGCCGTCTTGCCCGTTGTGCGGCTCCTCTTGCATCACAATAGACTGGTTCCCTTCGTCTCTGCCATCGCTGCCCTAGAGCTGGAGCAAACGCAGGAGGCCAACACGATATTCAGAGGGAATTCCTTGGCCACTCGGTGCATTGATGACACGATGAAGATTGTGGGAAAGAGCTACTTGACAatcTGTGACTCCAACAAAACCTGTGAAATCGATCCTGTCAGACTGAAAGAAGGTGACAATGTGGAAGTGAACAAGGAGAATCTGCACCAGTACGTACAGAAGGTGTTCAACTCCATCATCCAGTCCAGTATGAGCTGCCCCACCCTCATGTGCGATGTCTTCAACTCTCTGAGGCAACTCGCCACCAAACGATTTCCAGATGACCCCCATGTCCAGTACTCTGCCGTCAGCAGTTTTGTGTTTCTGCGCTTCTTTGCGGTCGCTGTGTTATCTCCTCACAGCTTCCATCTGCGCGCTCATCATCCGgaCGCAGACGTGTCCCGAACCTTGACTCTCATTTCCAAAACTATCCAGACACTAGGAAGCTGGGGCAGCTTATCCAAAAATAAACTGTCGAGTTTTAAAGAGTCGTACATGTATGATTTCTTCAAATCATTCCAAGAAGAGAAATGTATAGAAGAAGTAAAAAAGTTTTTAGATGAAATTTCCTCAAATGAAAGTAAAGAGTCGAGTGGTGTTGAAGAATCGGTCGTCCACAAAGAAGGGGAAGTGCATAAAAGAGCTCAGGGAAGAAAACGAATCGGCAAGAAGAACTTCAAGAAGAGATGGCTGCGTCTGTCCACTAGAGAGCTGTCTTACCACAAGGCCAAAGGTATActaCGCTGCAGTGGTGATAAGGTTGGGGCGATGGGGAAAGACGCCCTTTGCATCATTCCAATAAAAAACATCTTGGCTGTCGAGAAGCTTGAAGAGAGTGCCTTCAACAGGAAAAATGTAATTCATACTGAGAAGCCTCTCTACGTCCAGGCGAATAACTGTGTGGAGGCCAACGAGTGGATTGAGATTCTCAGCAGGGTTAGCCGTTGTAATCAGGGAAGGCTGAATTCATACCATCCTTCAGCTTATCTCTGTGGAAACTGGCTGTGCTGCAAGGCCACATCTGAGACCCAGCCTGGCTGCAAGCCATGCACTGCtaCCATGCCAGCAAATATTCAGCTTGACATCGACTGTGACCGTGAAATAGAGAGGATCTTCTCCTTATTTGTGTCAAACGCGCACAAGCTGCAGAAATTGGAAGAGGCTTGTGCAAGCATTGCAGTGTACCAAGGCCCCCAGAAAGAACAAGATGACTACTCCCACTTCACCATCCAGGATCCCAGGGTGACCttcaaaacaattaatcaaatccGTGATATTTCGGAGCAGCTGCGGGAGCATCACGAGAAGTTCCAAAAGAAAAGGTCGACAAGTGCTAAATATGGCAGCGAG

Function

GO: NA

KEGG:

id description
K08053 RASA2, GAP1M; Ras GTPase-activating protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009460 True 2393 mRNA 0.46 24 38378812 38414321

Neighbor

gene id symbol gene type direction distance location
AMCG00009458 NA coding downstream 11279 38357920 ~ 38367533 (-)
AMCG00009455 NA coding downstream 59379 38317970 ~ 38319433 (-)
AMCG00009454 NA coding downstream 80978 38290897 ~ 38297834 (-)
AMCG00009453 rnf7 coding downstream 97282 38279251 ~ 38281530 (-)
AMCG00009452 NA coding downstream 107102 38266199 ~ 38271710 (-)
AMCG00009461 NA coding upstream 18254 38432575 ~ 38436609 (-)
AMCG00009459 NA coding upstream 59863 38474184 ~ 38481035 (-)
AMCG00009467 daw1 coding upstream 340529 38754850 ~ 38762930 (-)
AMCG00009471 NA coding upstream 361237 38775558 ~ 38810559 (-)
AMCG00009470 NA coding upstream 402874 38817195 ~ 38820080 (-)
G57011 NA non-coding downstream 244846 38129295 ~ 38133966 (-)
G57018 LOC107653516,LOC107558362,LOC107706720,LOC107564248,LOC107705311,LOC107550449 non-coding downstream 249610 38128984 ~ 38129202 (-)
G57017 NA non-coding downstream 251134 38127468 ~ 38127678 (-)
G57016 NA non-coding downstream 251472 38125981 ~ 38127340 (-)
G57015 NA non-coding downstream 253449 38125149 ~ 38125363 (-)
G57143 LOC102787183,LOC106580884 non-coding upstream 86797 38501118 ~ 38503129 (-)
G57165 NA non-coding upstream 218791 38633112 ~ 38633397 (-)
G57194 NA non-coding upstream 358105 38772426 ~ 38773951 (-)
G57244 NA non-coding upstream 667100 39081421 ~ 39083424 (-)
G57351 NA non-coding upstream 1166290 39580611 ~ 39588074 (-)
AMCG00009437 NA other downstream 469844 37889502 ~ 37908968 (-)
AMCG00009417 NA other downstream 902777 37467254 ~ 37476035 (-)
AMCG00009408 NA other downstream 983824 37285576 ~ 37394988 (-)
AMCG00009409 selenot,LOC107681817,LOC106599070,LOC107708642 other downstream 1093447 37280548 ~ 37285365 (-)
G56800 NA other downstream 1158736 37215960 ~ 37220076 (-)
G57155 dner other upstream 165964 38580285 ~ 38582820 (-)
AMCG00009472 NA other upstream 413644 38827965 ~ 38837594 (-)
AMCG00009521 gigyf2,LOC107728389 other upstream 1707142 40121463 ~ 40157471 (-)
AMCG00009571 LOC107087052,LOC105890629 other upstream 3400238 41814559 ~ 41826934 (-)
AMCG00009582 NA other upstream 3626878 42041199 ~ 42056128 (-)

Expression


Co-expression Network