AMCG00009469


Basic Information

Item Value
gene id AMCG00009469
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 38814035 ~ 38817666 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009469
GGACCTTGGCTAATTCCACTAGCACGTTTGTTCAAGGCAAGTCAGATTACACCTATTGTcactttgcatatatattttgactCATCATAAATCACAGATCAgttttcatttgtatgtttGAACTAGCATTACCAGATGCCATAAACATACAGATATGCTTGGCCCCCTACCTTGCTGCTTACAGCTACAtctacatttgtttaaagaGTCCTTTGGTTTCCACTAATGAGCAGTGACAACATTTTTAACTATCTGTGACTTAAATtatgccaaaaaagaaaaggaaagatatatacaaacacaacacaaatagaTTGCGTGTGGACGTGTTCGAGAGGATCTTGTGACACACATTAAAGTTGATTAAGAGGTTGTACACCTTTGCCGTAGTCATAAAATATCACATCAGTGATGCATCACAGCTTCATGTACTTTCAACCAGGaaatacatttctcacaaaGCGAAAAAAACTCTCCGAATAATATTTAACCAGGAACAGTTTATAAAGGAGAGTGTGAGTTAAACCCCCTCAGTATCTTTCTCAGGACTGAACAATCACCCTCTCAGCCGTCAACATGACTTGCTGTGAAGGTTTTACCTCCTGCAATGGATTCTTCCTCATGTCTCTCTCCATTATAGCCATGGTCTTAAACTTGCTCCCAATGATGGCAAACTATGCGATGGATGGCCAGCTGTTTGAGAACCCGGTCTCCTGCTTTGAGTGGTGGCTGCCTGGATTAGTGGGAGGAGGTATTTTGGTTCTGCCAGCAGTGTCAATGGCTTTCGCTGCAAAGAAGGGAGGAAGCTGTAACTCTAGAATTGGGatgCTCCTGTCGGCTTTCTTATGCATTGTCAGCATTATTGGTGCACTATACTGTGTATTAATATCTTTGTTTGCCCTGGGGAGTGGTCCATTGATATGCAAGGGCCCCCAAGCTGGATTATCCTCTTGTGATTTCAGCATAAAAAACATCAGCTCCTATTCTGAGCTGAACTTCGACATCACATGGTACCTCGAGGCGGACGGCTGCAGAAACGTCACTGAGAGGAGTGGAACCGGAAACCATTTCGTGAATGCAGACCTGTCTATAGATCTGAATGAGGCCCAGCTGGTCAATCTGCACCTCATCACCTTCGCCGGGCTCAGTGCGGTCGCTCTGCTGGAGATCATCTTCAGCGTCCTGCAGATAATGGCCGGACTCTGTGGCTGTGTGTGCGGCACTTCAAACAGGACTAGGCCGGTGTAGCACGACCCTCTAGCCTCGGCAGATCTTCTTAGTTGTAGTACTGTCATTATTGTTCATCTTGACTGACAGACTTGTTTTGTGCGTATTATACATTTCTTGTCAACAACACAATCGAGTTGAAGTCACAAAGTATCTTACTGGCTAATGAAAATTATGAACCAAAGAAGTAGCAATATGTTATACCCTCCCTTCAGGGCACTTAGCTAAGCCATATATAATTGCACATATTCATCCTAAtacaagaattgtattttttacaccTACAGGGGGCATTGCCAACTAAAACTTGCACTTTTAATATTTCTTGTTGCATTTGTGGAAACTCATTAAAGTACATGCCAGAATAGTATatacttgttttttaatggaaaatgtattgtttttaattaccagGCACTACACAATTATCCCTGTGCTCTGGATctactttttcatttgtttattacggtgtactatttatttattaataaaaaacatacatgtatgaagcctacagattattttcttgtaaacaCTAAGACTCAATAAATCCACCCGTTCTGAATAAAGGATGTAAATCAACA

Function

GO: NA

KEGG:

id description
K24923 TM4SF20; transmembrane 4 L6 family member 20

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009469 True 1811 mRNA 0.41 4 38814035 38817666

Neighbor

gene id symbol gene type direction distance location
AMCG00009466 NA coding upstream 38425 38763771 ~ 38775610 (+)
AMCG00009465 NA coding upstream 63010 38740320 ~ 38751025 (+)
AMCG00009468 NA coding upstream 84649 38655785 ~ 38729386 (+)
AMCG00009464 pid1 coding upstream 198197 38614820 ~ 38615838 (+)
AMCG00009463 dner coding upstream 230604 38541989 ~ 38583431 (+)
AMCG00009473 NA coding downstream 24290 38841956 ~ 38843311 (+)
AMCG00009474 NA coding downstream 51821 38869487 ~ 38900537 (+)
AMCG00009477 NA coding downstream 316188 39133854 ~ 39155094 (+)
AMCG00009479 NA coding downstream 459425 39277091 ~ 39302785 (+)
AMCG00009484 NA coding downstream 560583 39378249 ~ 39393565 (+)
G57164 NA non-coding upstream 180684 38633097 ~ 38633351 (+)
G57161 NA non-coding upstream 185900 38627919 ~ 38628135 (+)
G57036 NA non-coding upstream 533556 38202794 ~ 38280479 (+)
G56995 NA non-coding upstream 680069 38130082 ~ 38133966 (+)
G56982 NA non-coding upstream 745882 38063790 ~ 38068153 (+)
G57286 NA non-coding downstream 485671 39303337 ~ 39306230 (+)
G57287 NA non-coding downstream 488822 39306488 ~ 39306774 (+)
G57329 NA non-coding downstream 641732 39459398 ~ 39459676 (+)
G57378 NA non-coding downstream 988917 39806583 ~ 39806928 (+)
G57401 NA non-coding downstream 1057215 39874881 ~ 39875170 (+)
G57105 NA other upstream 356443 38442255 ~ 38457592 (+)
AMCG00009428 NA other upstream 1197339 37608305 ~ 37616696 (+)
AMCG00009429 NA other upstream 1208911 37530822 ~ 37605124 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other upstream 1350530 37422017 ~ 37463505 (+)
AMCG00009405 pfn2,LOC105899220,LOC106598797,LOC105028925 other upstream 1446364 37348108 ~ 37367671 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other downstream 617234 39434900 ~ 39437017 (+)
G57430 NA other downstream 1130340 39948006 ~ 39949200 (+)
AMCG00009516 NA other downstream 1268808 40086474 ~ 40105052 (+)
G57604 NA other downstream 2173136 40990802 ~ 40994659 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other downstream 2778563 41596229 ~ 41599124 (+)

Expression


Co-expression Network