AMCG00009470


Basic Information

Item Value
gene id AMCG00009470
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 38817195 ~ 38820080 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009470
AAGGACCCGGAACTGTATGTATCCGAGTCGCAGCGCAGAGGGGACGCTTCCTGGTGACGCACACTGCCTGCGAGCTGTCATGGCGTCCGGGTACCTGGTCGGTCGTGTCTTGTCCCCGCTGGGAGTTCACGTCCACAGGGTGTGCAGGACTGTCCTCCTCACGCAGACCCGAGAGAAGAAGCGATGGATGAAAGCTTACACGTTGTTgatggagaggaagaggaagctgGAGGGACCGCCAGCAGCCAAACCCCGCTCTCATCAGCCTAACTGGGATTACCATGCCGAGATCGAAGCTTTCAGTGCTCGGCTCCACGAGAACTTCTCCCTGGACCTCCTCAAGACGGCCTTCGTCAATCCCTGTTACGTCCAGAGGGAAGAGGTGAACCGCCGGGAGCTCGGTGTGGACAAGGAAACTGTGGCTCTGAGCCTGAAGGACAATCTGGAGCTTGGCAGACAGGGGCGGGAGTTCTCCGAGAGCTACCTCACCGACTGGTGCCGGAGCAACTACCCCAGCCTGCCAGCTGAGGGCGTCGGCGCCGTCATGCGCTACCTGAGCCAGCCGGCCGTCGTGTGCCATGTGGCCCGAAACTTGGCTGTGGAAGAGCTGACCCTGAGCGCCCAGTTCCCCGTTCAGGAGGAGGTTCTGCAACAGACGTTTTTCGCCGTGATCGGGGCGTTGCATCAGAGCAGCGGCCCACAGAGAGCGGGCTACTTTATCCGGGACTTCTTAATAACTCAGCTGATTGGGAAGGACCTGTTTGAACTCTGGCCTGTGGTCAACCCAATGGGCCTGCTGGTAGAGGAACTGACTCGCAGGAAGCTGTCTCTGCCAGAGCCCCGGATCACGAGGCAGtctggagccagcactgtgcTACCCCTCTACTTTGTTGGCTTGTATAGtgatAAGAAGCTGATTGCGGAGGGTCCTGGGGAGACGGTCCTCGCTGCGGAGGAAGAGGCGGCCCGCGTTGCCCTCCGGAAGATCTACGGGTACACAGAGAACAGGCCACCCATGGACTTCTCCAAACCCAGAGAGGAGCCCACGGATGCCCAGGCCATCCGCAGCACTTAGCCACTGCAATATTTCAACGGTCATCCTATGTATCGCACTGATAACAACCGGAGATCTTCAGACTTGTATCTGGCTGCTTCCAAGGACTGACTCACATTCAGGATCATTAGACTGATGTTAGAAtgtggattatttttttttgtatttgattgttaTTATTGGTTGTGAATAAAAAAGTCACGAGAAGAAATGTCTTATCACAGCAATTGTGTGTTGTTGATTTACATCCTTTATTCAGAACGGGTGGATTTATTGAGTCTTAGtgtttacaagaaaataatctgtaggcttcatacatgtatgttttttattaataaataaatagtacaccgtaataaacaaatgaaaaagtagATCCAGAGCACAGGGATAATTGTGTAGTGCctggtaattaaaaacaatacattttccattaaaaaacaagtatATACTATTCTGGCATGTACTTTAATGAGTTTCCACAAATGCAACAAGAAATATTAAAAGTGCAAGTTTTAGTTGGCAATGCCCCCTGTAggtgtaaaaaatacaattcttgtaTTAGGATGAATATGTGCAATTATATATGGCTTAGCTAAGTGCCCTGAAGGGAGGGTATAACATATTGCTACTTCTTTGGTTCATAATTTTCATTAGCCAGTAAGATACTTTGTGACTTCAACTCGATTGTGTTGTTGACAAGAAAT

Function

GO: NA

KEGG:

id description
K17425 MRPL44; large subunit ribosomal protein L44

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009470 True 1761 mRNA 0.50 4 38817195 38820080

Neighbor

gene id symbol gene type direction distance location
AMCG00009471 NA coding downstream 6636 38775558 ~ 38810559 (-)
AMCG00009467 daw1 coding downstream 54265 38754850 ~ 38762930 (-)
AMCG00009459 NA coding downstream 336160 38474184 ~ 38481035 (-)
AMCG00009461 NA coding downstream 380586 38432575 ~ 38436609 (-)
AMCG00009460 NA coding downstream 402874 38378812 ~ 38414321 (-)
AMCG00009475 NA coding upstream 88942 38909022 ~ 38935195 (-)
AMCG00009476 NA coding upstream 192762 39012842 ~ 39013371 (-)
AMCG00009478 LOC107577679 coding upstream 446116 39266196 ~ 39271483 (-)
AMCG00009485 NA coding upstream 485893 39305973 ~ 39308183 (-)
AMCG00009487 NA coding upstream 493207 39313287 ~ 39398165 (-)
G57194 NA non-coding downstream 43244 38772426 ~ 38773951 (-)
G57165 NA non-coding downstream 183798 38633112 ~ 38633397 (-)
G57143 LOC102787183,LOC106580884 non-coding downstream 314066 38501118 ~ 38503129 (-)
G57011 NA non-coding downstream 683229 38129295 ~ 38133966 (-)
G57018 LOC107653516,LOC107558362,LOC107706720,LOC107564248,LOC107705311,LOC107550449 non-coding downstream 687993 38128984 ~ 38129202 (-)
G57244 NA non-coding upstream 261341 39081421 ~ 39083424 (-)
G57351 NA non-coding upstream 760531 39580611 ~ 39588074 (-)
G57354 NA non-coding upstream 768606 39588686 ~ 39588911 (-)
G57379 NA non-coding upstream 986555 39806635 ~ 39806927 (-)
G57400 NA non-coding upstream 1053891 39873971 ~ 39874229 (-)
G57155 dner other downstream 234375 38580285 ~ 38582820 (-)
AMCG00009437 NA other downstream 908227 37889502 ~ 37908968 (-)
AMCG00009417 NA other downstream 1341160 37467254 ~ 37476035 (-)
AMCG00009408 NA other downstream 1422207 37285576 ~ 37394988 (-)
AMCG00009409 selenot,LOC107681817,LOC106599070,LOC107708642 other downstream 1531830 37280548 ~ 37285365 (-)
AMCG00009472 NA other upstream 7885 38827965 ~ 38837594 (-)
AMCG00009521 gigyf2,LOC107728389 other upstream 1301383 40121463 ~ 40157471 (-)
AMCG00009571 LOC107087052,LOC105890629 other upstream 2994479 41814559 ~ 41826934 (-)
AMCG00009582 NA other upstream 3221119 42041199 ~ 42056128 (-)
G58025 NA other upstream 3828770 42648850 ~ 42673707 (-)

Expression


Co-expression Network