AMCG00009477


Basic Information

Item Value
gene id AMCG00009477
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 39133854 ~ 39155094 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009477
ATGCCCAGGATCGGCGAGGACGTCGCGAGAGGAACCGACAGCAGCTATGTGGGCAAGCACTTCCGAATGGGATTTATGACCATGCCAGCACCTCAGGACCGCCTTCCCCACCCGTGTGGTACTGGGTTTTCTGTCCGGTCGCAATCACTGCACTCGGTGGGGGGCGGTGACGAAGACAGTGCCAATTCCCGCAAGCAGCCTCCCCCCAAACCGAAACGAGACCCCAACACCAAGCTGAGCATCTCCTCGGAGACCGTCAACACAGGGACCACGTGTAAAGCAGGAAAAGATCTGGACGCATCGTCAAAACCAAGGCCATACAGtgaggaatacaaaaaaatcccGCCTCCGAAACCTAAAAGAAATCCAAACACTCAGCTTAGCACGTCTTTCGATGAGTCTTACATCAGGAATCACGGGACCAAGAAGTCGTCCAAGAAGGAGACCTCTTCGTCTCAGACCCACAGCCCAGCCAGAGACACGGACGAGGACGAGCCGGTGTACATCGAAATGGTCGGCAACATCCTAAGGGACTTCAAGAGGGACGACGACGACCAAAGCGAAGCGGTCTACGAGGAAATGAAATACCCCATCTTCGATGATCTCGGCCAGGACTCCAAATGGCCCAGTATTTGCAATTCTGATCACCTCAGCTGTTCTTCTCCGTGTGCTACTCCCACAGTGCCTGACTTGGAGCTCACCAAGTCGTCCATGATGTCCACTGCAAAGGGCGCGCTCTGCGACATCCCAGCGCCCTTCCCAAACCTGCTCTCCCATAGACCTCCCCTCCTGGTCTTTCCCCCCGCCCCAGCGCAGTGCTCGCCCAATTCGGACGAGTCCCCACTCACGCCCCTGGAAGTCACCAAACTGCCAGTCCTGGAGAACGTGTCCTACATCAAGTCCGGAGCCTCgccctcctctgcctcctctcagACCTCCATCCACCAGAAGATGGAGAAAGAACTGCCCCCCACGCAGACCATCACGGCCTCCGGGAGGTCCTCCGCCCCGCCACTCAGCTCGACGCTGTACAAATCCTCCGCCTCTGCTCACGGGTACCCCAGGAGTCACTCGGCCTGCCCATCGCCGGTCAGCATGGGCAGGTCTCTGACTCCCCTGAGCCTCAAGCGACCCCCACCGTACGACTCGCTCATTTCAGGGACTATGCCCAGGAGCTCATCCTCAGTGCCTCACTCATTAATCAAAAACACTTCTCAAGAAGGGGCCAAGCTGGCGAACTCCTCCTCCAGTGCCCACGGGTCCATGCAGAACGTCTCCCGCTCCAGGACCCCCACCAGCCCTCTAGATGAACTAACAAGCCTTTTTACCTCAGGGCGGAGCCTCTTGAGGAAATCTTCCAGTGGCAGGAAGTCCAAGGAGCCTGCAGAAAGTGAAGCCAAGAGCAGGAGTCACAGTACCGAGCCGCTTCCCAGGCACGAGAGCAAAGACAGAGGGGGTCACCAGGGAGGGACCCCCAAAGAGTCACCGAAGGCCCACGAGTGGGACGGTGTGCCAGGGCAAACCGCAGCTTCCAGCAGGCTGGGCCGCACGTCCGTCAGCCCCACACTGATGCTCGGTGGCACTGGCAGCTCAGAATCGAAAGCCGTATGCAAGCTGGGCCGGTCTGCCTCCACGTCGGGCGTACCTCCTGCCTCCGTCGGCCCTCTGAGGCAAGGCGGAGAAATGCAACAGAGCCAGGTACCACCGTTAGACAGTCGTGAATGA

Function

GO: NA

KEGG:

id description
ko04713 Circadian entrainment
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009477 True 1725 mRNA 0.59 5 39133854 39155094

Neighbor

gene id symbol gene type direction distance location
AMCG00009474 NA coding upstream 233317 38869487 ~ 38900537 (+)
AMCG00009473 NA coding upstream 290543 38841956 ~ 38843311 (+)
AMCG00009469 NA coding upstream 316188 38814035 ~ 38817666 (+)
AMCG00009466 NA coding upstream 358244 38763771 ~ 38775610 (+)
AMCG00009465 NA coding upstream 382829 38740320 ~ 38751025 (+)
AMCG00009479 NA coding downstream 121997 39277091 ~ 39302785 (+)
AMCG00009484 NA coding downstream 223155 39378249 ~ 39393565 (+)
AMCG00009483 NA coding downstream 238475 39393569 ~ 39401188 (+)
AMCG00009482 NA coding downstream 249235 39404329 ~ 39405173 (+)
AMCG00009481 NA coding downstream 254398 39409492 ~ 39415596 (+)
G57175 NA non-coding upstream 298909 38757380 ~ 38834945 (+)
G57164 NA non-coding upstream 500503 38633097 ~ 38633351 (+)
G57161 NA non-coding upstream 505719 38627919 ~ 38628135 (+)
G57036 NA non-coding upstream 853375 38202794 ~ 38280479 (+)
G56995 NA non-coding upstream 999888 38130082 ~ 38133966 (+)
G57286 NA non-coding downstream 148243 39303337 ~ 39306230 (+)
G57287 NA non-coding downstream 151394 39306488 ~ 39306774 (+)
G57329 NA non-coding downstream 304304 39459398 ~ 39459676 (+)
G57378 NA non-coding downstream 651489 39806583 ~ 39806928 (+)
G57401 NA non-coding downstream 719787 39874881 ~ 39875170 (+)
G57105 NA other upstream 676262 38442255 ~ 38457592 (+)
AMCG00009428 NA other upstream 1517158 37608305 ~ 37616696 (+)
AMCG00009429 NA other upstream 1528730 37530822 ~ 37605124 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other upstream 1670349 37422017 ~ 37463505 (+)
AMCG00009405 pfn2,LOC105899220,LOC106598797,LOC105028925 other upstream 1766183 37348108 ~ 37367671 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other downstream 279806 39434900 ~ 39437017 (+)
G57430 NA other downstream 792912 39948006 ~ 39949200 (+)
AMCG00009516 NA other downstream 931380 40086474 ~ 40105052 (+)
G57604 NA other downstream 1835708 40990802 ~ 40994659 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other downstream 2441135 41596229 ~ 41599124 (+)

Expression


Co-expression Network