AMCG00009487


Basic Information

Item Value
gene id AMCG00009487
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 39313287 ~ 39398165 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009487
ATGAAGGAGACTTGGCTGAGTACCATCTGGTCCAACTGGCCCAGGATATCCATGATCACCTTTAGGACCTCGATCTCCCGGGATGCCGCCAGGAGCTCCGGGGTATCCCTTGTCTCCTTTGTCTCCTTTGACATCATTTGTGATGGAGCCTGGAAGCCCACGGACACCTTTGGGACCTGCAAGCAGGAGAGCCTTGTAACCCGGAAGGACCAGCGGACCCTGGATTTCCTGGCTGCCCTCGACCTCCTGGATTGCCTTTCTCCCCTTTTCGACCTGGGCATGGCAATGGAAAGGCATAATGACATCAGGAAAAGACCCAATATGACCCTGGGGGCCCAGGAAAACCTTGACCACCTGGAACTCCATCAAGACCCTGAGGTCCAGTTTCCCCTgagcagagaaacacagaagaaCACTTGTGCCAGGAAGTCCTATCAGGCTGTCCAGGATCACCATCCAGTCCTGAGGGTCCGCTCCCCCCTTGGACACCTGGGCCTCGGACCCCTGGGGGCCCATTTACCCCTGGGGGCCCACATTCTCCGGGCACCCCTGGGATCCCAAATCCATGCTCTCCCTTTGGTCCTGATGGTCCAGGCGGTCCCTGAAGTCCACTATCCCCTACTGGCCCGGCAGCCCCATCCTCTCCCATCGGCCCTGGTCTGCCCTGGGGCCCTGAAGGCCCGTACCCCAGGCTGCCCTGAAAGAACATATGGATCCCTGGATGTCATCCAGCCCTGCCTGGAAAGGAACCACGTTCAGGTCGTCCAGGACACCCTGATGAAGAACTGCCTGGGGTTCCTGATTCACGTACTGGCAATCCTGGAAGCCCGGCTGACCCTGGCAGACCCTTCCATCCTGGAGGCCCCGGCAATCCCTGAAACACGCACAATATGTCTGGCCAAATCCCGCAACACAAGAAAACCCCCCAAAGGAGAGCTTGCACTCGGGGTGATGgtcaaaataacaaagcagcagcagcagcagaagaagaagaaggagaagaagaagagcagggccacagacgGAGCATACAGCAGAGAAGAAGCACAACATGGACCACCGGGTGAACTTGGGCTTCGGGGCCCAGTCGGACCCCCAGGCAAAGCAGGCATTCCTGGGTTGCCAGGCGAGAAAGGACAGCGAGGGGACGAGGGGCTGACCGGAACAGCGGGGCAAAAGGGGGACATGGGTTTCCTGGATTTCAAGGAACAGAAGGCATCCctGGCCACCCAGGTTCCGGGGGTCCCAGGGGCCTGCCTGGGCTGGACGGCTGTAATGGATCGCGGGGTGACCCTGGATTTCCTGGGACCCCTGGATTACATGGCTACCCTGGAGTACAAGGTCCACCTGGTATACCTGGCCCAAAAGGGCCTCCGGGTGAACCTGGACACCCCATACCAGGACTACAAGGAAATCCAACACAGGGATTACACTTTGGTGTGTTTTCGACAGGGGGATGTAGGGATGCAAGGAGAACCCGGACCTTTTGAGTATGTGCAGCCCCCTGTGGAGTTTAAGGGAATGAAGGGGTTTGAGGGCGACCTAGGTCCCGAGGGTGCTCCAGGGTACCGTAACGGATTGCCAGgggagagaggagacgTGGGACCCCCTGGCCAACCTGGACCCCTAGGAGATGAGGGTCTCATGGGCATGCCTGGTGAACCAGGACCCAAGGGGTTCTTCACATTTgGACTTACAGGGGATTGTGTTTGTGGACCACCCAAGGACATCCTGGGACCCATTGGTCCTCCGGGGCCTCGAGGCAACCCAGGGCCTCCAGGGTTTTCTGGAAACTCTGGTATAAGGGGGGATATTGGTGACTATGGCCAACCTGGGACACAGGGCACGAGTGTAGGAGAGGTGTTACTGGCCCTCCAGGACCCTCGGGTCCATCAGGAGCCACTGGAAATCCCGGAGAAGATGGCATACCAGGAATCCCTGGTCTCCCGGGACCACTTggtGACAACAACCCAGGATACCCAGGAGATAAGGGCTTTCCTGGGCTCATTGGTAAACGGGGGGCCCCAGGTCCACAGGGGCCTCCAGGGGTTGAAATCATGGGGTCCAATGGCCAGCGTGGGCCACCAGGAGAACAGGGCCCACCAGGAGAAGACGGACTTATGGGAAACAAGGGCCAAATGGGTGACACTTACCCATGTGTACCTAGAATACCAGGCCCAGATGGCCCAAAGGGATTTTCTGGTCAATCAGGACCCCCAGGGAGGCCTGGCGCTCAGGGCTTTCCAGGTCCTCAAGGTGTTGATGGTCCCAGAGGACAGAGAGGCGAACCAGGAGACAGGGGCCCCAATGGGCCTCCAGGTCCACCTGGTTTCAAGGGGCCAACTGGTGAATCCATTCCAGGCAGTCCTGGAGTCAGCGGGCCTATGGGCCTGCCTGGGCTCCCAGGGGTTAAAGGCATCCCTGGGGCACGTGGCCAGCCTGGAGGAGATGGACAAAAAGGAGGTGAAGGAGACCCTGGGCCCAGTGGGCAACCAGGACCACCAGGCTCTTCTCCTGTTCAGTGTGACTCGGGGCCCCCAGGACAGATGGGACCTCCAGGGCTCACCGGGTCATTTGGCCACCCAGGTTTTAGTggtgaaaaaggaaataaaggtGAAGTTGGAGACCCAGGTGGCTTTGACAGAAAGGGAATGCCTGGAAAACCTGGAGCCCCAGGGCCACCAGGAAGTCCCGGGTCCCAGGGCCCTCCTGGACCACTCGGAGAGTCTGGCCAAACCGGATTGCCTGGACAAAAGGGCTATCCTGGCATTCCTGGTCGTCAGGGACCCCCTGGGCAGTCAGGACGACAAGGCGCTCTCGGGCAAAGCGACAAGGGATCGAGCGGTGAAGAGGGGCGGCCTGGTGTTCCTGGACGGCCTGGATCGCCAGGGTTCGAGAGCGGGCCTCCTGGCTCCCCAGGGAGGAATGGAACACCAGGGCCGCCGGGAGCTCCAGGCATTGCAGGGATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009487 True 2970 mRNA 0.60 32 39313287 39398165

Neighbor

gene id symbol gene type direction distance location
AMCG00009485 NA coding downstream 5104 39305973 ~ 39308183 (-)
AMCG00009478 LOC107577679 coding downstream 41804 39266196 ~ 39271483 (-)
AMCG00009476 NA coding downstream 299916 39012842 ~ 39013371 (-)
AMCG00009475 NA coding downstream 378092 38909022 ~ 38935195 (-)
AMCG00009470 NA coding downstream 493207 38817195 ~ 38820080 (-)
AMCG00009486 NA coding upstream 51552 39449717 ~ 39469293 (-)
AMCG00009491 NA coding upstream 118282 39516447 ~ 39520080 (-)
AMCG00009494 NA coding upstream 191703 39589868 ~ 39614413 (-)
AMCG00009492 fgf12a,fgf12,LOC107572463,LOC107704679 coding upstream 248661 39646826 ~ 39654320 (-)
AMCG00009493 fgf12,fgf12a,LOC104939444,LOC102791340,LOC107384013,LOC100711708 coding upstream 281753 39679918 ~ 39692549 (-)
G57244 NA non-coding downstream 229863 39081421 ~ 39083424 (-)
G57194 NA non-coding downstream 539336 38772426 ~ 38773951 (-)
G57165 NA non-coding downstream 679890 38633112 ~ 38633397 (-)
G57143 LOC102787183,LOC106580884 non-coding downstream 810158 38501118 ~ 38503129 (-)
G57011 NA non-coding downstream 1179321 38129295 ~ 38133966 (-)
G57351 NA non-coding upstream 182446 39580611 ~ 39588074 (-)
G57354 NA non-coding upstream 190521 39588686 ~ 39588911 (-)
G57379 NA non-coding upstream 408470 39806635 ~ 39806927 (-)
G57400 NA non-coding upstream 475806 39873971 ~ 39874229 (-)
G57524 NA non-coding upstream 761232 40159397 ~ 40159608 (-)
AMCG00009472 NA other downstream 475693 38827965 ~ 38837594 (-)
G57155 dner other downstream 730467 38580285 ~ 38582820 (-)
AMCG00009437 NA other downstream 1404319 37889502 ~ 37908968 (-)
AMCG00009417 NA other downstream 1837252 37467254 ~ 37476035 (-)
AMCG00009408 NA other downstream 1918299 37285576 ~ 37394988 (-)
AMCG00009521 gigyf2,LOC107728389 other upstream 723298 40121463 ~ 40157471 (-)
AMCG00009571 LOC107087052,LOC105890629 other upstream 2416394 41814559 ~ 41826934 (-)
AMCG00009582 NA other upstream 2643034 42041199 ~ 42056128 (-)
G58025 NA other upstream 3250685 42648850 ~ 42673707 (-)
G58333 NA other upstream 4084256 43482421 ~ 43945297 (-)

Expression


Co-expression Network