AMCG00009497


Basic Information

Item Value
gene id AMCG00009497
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 39839181 ~ 39843864 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009497
CTTATATTATAAAAAGCTCCATCAGAAAGGGGACTTCTTATCATTTTATAGCGTCTAAGCAAGAACAAAGTTCCCTCAGAGCTACGAGGAGACAATTGAAGACAGGAGGGCAGACGTTGTGGATCAGGAAGGGAAGTTACGGCTGTGGCTGTGGATTTGATCTCGCTTCACTTTGTGTTTGGCTatttgctttggttttaaaTTTGCTGGAATTACTGAGGTCTGATCATGTCGACTGCGATAGAAGTGATGGGATTATTGCTGTGTCTGGGCGGCTTGCTCATCACCGGGGCCTCTCTAGCCAACGACAGCTGGAAAGTGAACAGTAATTATGACACTGTCTTAACCTCCAGCCAGCAGTATGAAAACCTATGGAGGACCTGTCTCTCGGACAGCAGGGGCATCATCAACTGCAAAACCTTCGAGTCCTTGCTGGCCCTGCCTGccTATATACAAGCATGCCGGGCTCTGATGATCGTCTCTTTGCTGATTGGGGTGATGGGTATCATCGCAGCACTGATGGGCCAGAAGTGCACTAAGATTGGCAGTGCCAACAACCAGACCAAGGGCAAGATCGCCTTGATGGGCGGGATCTGTTTCATCTTTGCAGGACTGAGCTCCCTGGCAGCTGTCTCCTGGTATGCCAACCAAATTATTCAAGAGTTCTACAACCCTTTCAATGGGGGCACCAAGTTTGAGCTTGGTGTGGGTCTGTACATTGGCTGGGGGGGtgcctttctttccattttggGGGGCGCCTTACTCTGCTGCTCCTGTAGAAACTCTGGAACCGCCCCCAAAAGgaCATACAATTACGACTACTCAGCGGCTGGCAGCACCAACCAGCAGAAGATCTACAAAGCCCCCCCTTCAGAGTCCTCTAAAGCCTATGTTTGAGCCGATTCTCCTTGtcccttgtttttgttgtcaatGATGATGTTAGTATATTCTTCAGGTTTTTTTACGCCACATTTGAAagtcaattatttgtattcaaataatttCCATGTAAACGTAAATCATTGTTTCTATTTCAAATAAAAGGAGAAATTATAAACTtaaagaagatgaagaagaataTGAGTTAGCTTGGGACCATAATTAGCTGGtacttaatttgtaattttaataaaatatggttTGCTATCTTTTCTTTTGGGGTGTGTCAATGTCTGCTTATATAGAACGTAATAatgtacatgaataaataaaaccaaaaactgaaagagagaaatatcaaagtaagaaagaaaaatgtaaaacaatacatattcctTCTGGAAAACAGGAACATTAGTAAATATGAAGAGTTCTGTACAATACTTCAGCTGAATGCTGCCTTCTTGTGGAAGCTGCCCAGAGGTTTTATAGATGTCGTCAATCATTGCCTAAAACTGAACTAATCGTAACAGATTAAGCCAGTAACCAGAGTGACCAGAGTGATAGCCTTACAGGCAATATCTCAGGTATGCTCTACAAACAACTGACAATAAGTTTAGTATCTTGCAGAGAGACAAAAGTAgtatattactattaatatacAGGACTACAAATGTGTTGTAGGGGACACACATTTATCCGAAGAACCAACGTGCATCCATATTATTGCAAAAATACTTgtcatacattattatttacatcgtttttttctgtctaatcTGTTGCTCTAGATTAATCTAGAAACCTAATGACTAGCTTCGACCTAATATACACAACtgtaatatactataatatgtaatattttattgtactaGCCTATAAGATGTTGTACTGCATTGTGATGCACTGTCCTATAATACACTGCATTGTAATTTACTACAGACTATTATAAATAAAGtcctgtattgtgttgtatgtCAAAATGCCTATattttat

Function

GO:

id name namespace
GO:0030054 cell junction cellular_component
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009497 True 1876 mRNA 0.40 5 39839181 39843864

Neighbor

gene id symbol gene type direction distance location
AMCG00009499 NA coding upstream 1544 39827306 ~ 39837637 (+)
AMCG00009496 NA coding upstream 24403 39807424 ~ 39814778 (+)
AMCG00009488 NA coding upstream 272895 39560727 ~ 39566286 (+)
AMCG00009490 NA coding upstream 330677 39505934 ~ 39508504 (+)
AMCG00009489 NA coding upstream 335812 39483161 ~ 39503369 (+)
AMCG00009495 atg16l1,LOC107689588,LOC107551872 coding downstream 1545 39845409 ~ 39863181 (+)
AMCG00009498 NA coding downstream 21864 39865728 ~ 39872722 (+)
AMCG00009504 dgkd coding downstream 40138 39884002 ~ 39922108 (+)
AMCG00009506 NA coding downstream 79070 39922934 ~ 39930133 (+)
AMCG00009505 NA coding downstream 86282 39930146 ~ 39938281 (+)
G57378 NA non-coding upstream 32253 39806583 ~ 39806928 (+)
G57329 NA non-coding upstream 379505 39459398 ~ 39459676 (+)
G57287 NA non-coding upstream 532407 39306488 ~ 39306774 (+)
G57286 NA non-coding upstream 532951 39303337 ~ 39306230 (+)
G57175 NA non-coding upstream 1004236 38757380 ~ 38834945 (+)
G57401 NA non-coding downstream 31017 39874881 ~ 39875170 (+)
G57428 NA non-coding downstream 97358 39941222 ~ 39943036 (+)
G57457 NA non-coding downstream 186682 40030546 ~ 40033333 (+)
G57523 NA non-coding downstream 315545 40159409 ~ 40159626 (+)
G57544 NA non-coding downstream 495518 40339382 ~ 40343381 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other upstream 402164 39434900 ~ 39437017 (+)
G57105 NA other upstream 1381589 38442255 ~ 38457592 (+)
AMCG00009428 NA other upstream 2222485 37608305 ~ 37616696 (+)
AMCG00009429 NA other upstream 2234057 37530822 ~ 37605124 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other upstream 2375676 37422017 ~ 37463505 (+)
G57430 NA other downstream 104142 39948006 ~ 39949200 (+)
AMCG00009516 NA other downstream 242610 40086474 ~ 40105052 (+)
G57604 NA other downstream 1146938 40990802 ~ 40994659 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other downstream 1752365 41596229 ~ 41599124 (+)
G57830 NA other downstream 2192154 42036018 ~ 42078241 (+)

Expression


Co-expression Network