AMCG00009505


Basic Information

Item Value
gene id AMCG00009505
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 39930146 ~ 39938281 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009505
ATGGGCTCCTTTAGCTGGATTCCCATTaagaagaaagaaacatgtTGCCACCGTCTCTCTTCCTCGCCGCTCTCTCGCTCCTCTGCCTCGGAACGGTCTCTGCAGTCTCCGGAGATGTACCCCGGGAACCTGGAGCGGGAGTGTTACGAGGAGACCTGCAATTTTGAGGAGGCCAACGAGATCTTCCAGACCAAGGAGAAAACGAACCCCTGTCTGAATGGAGGGATTTGCAGCTTCACTAATCAGAATTACATGTGTCTCTGCCCGCCCCGCTTTGACGGCTACAGGTGTGAGACAGAGATCTTCGAGTGCCAGTATAAGAACGGGGGCTGCCAGCAGTACTGCACGAACCGGTTCCGCACCGTCAGCGTGCAGTGCAGCTGGAACAACTTCCGCTCCCTTCTGGATGAGGAGGACTTTATGGACGACACCATGCTGTCACTCAACAACACGCTGTCAGGCAACGACACACTGTCACTCAACAACACGCTGTCACTCAACGACACTCTGTCGCCTGACAATGTCACAGACAGCCCCACCCCCGAGCTCCCGGGCAGCGACAACAGTGACGTCCGCATTGTGGGTGGAGACTTGGAGGTGCAGGGCGGGAGTCCCTGGCAAGTTCTGGTCCACAGGAAGGATGGCTATGGGTTCTGTGGGGGGTCTCTGATCACAGAGCGCTGGGTGGTCAGCGCCGCACACTGCTTCGATGGAAAACCTGACCATGTGACCTTGGGGAACTATGACAAGTTCGTGCGGAACCAGGACGAGCAGAAGATCGCGGTGCAGGCGCTGGTGGTGCACCCCCACTACCACGCTGACACCTACGACAGCGACAtcgcgctgctgctgctggccaGGCCCGCCATGCTGGGGCCCTACACCTCGCCCATCTGCCTGCCCAACGGCAACCTGGCCCGACTGCTGCTGCAGGACGACGTCATGGGCACGGTGAGCGGCTGGGGCTCCACGCGGCACCTGGGGCCCTCCTCCCGCTTCCTGCGCAAGGTGCGGCTACCCGTGGTCAACCAGCAGAAGTGCATGAGCTCCACAGCCCAGGTCGTCACCGACAATATGTTCTGTGCCGGCTATGCCGACGTGGCGCGGGACTCCTGCAAGGGCGACAGCGGCGGCCCCTTCGCCAGCCTTTACCAGGGCACCTGGTTCCTGACAGGCGTGGTGAGCTGGGGCGAGGAGTGCGCCGCTAAGGGCAAATATGGCGTCTACACCCGTGTGGACAACTTCCTGCCCTGGATCCAGGATACAGTGGCCTCAACGGCAGCGTCACTTAAATAACAGACCGGAGCCATCGCCCGAGGCCACTGGGGAACGCCAGGCTTCACCACAAACGTCCAGGATGCCTTCAGTGCCTGTTGCTGTTCTCAGAGTGTAATCTATATACATCTGTTCCGGGTTATGATTGTATATGTAGAgagcattttatatattttttaattgcatcgCACATACAagttgaattatatatataatatatatacactcacctaaaggattattaggaacacctgttcaatt

Function

GO:

id name namespace
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009505 True 1536 mRNA 0.57 8 39930146 39938281

Neighbor

gene id symbol gene type direction distance location
AMCG00009506 NA coding upstream 13 39922934 ~ 39930133 (+)
AMCG00009504 dgkd coding upstream 8038 39884002 ~ 39922108 (+)
AMCG00009498 NA coding upstream 57424 39865728 ~ 39872722 (+)
AMCG00009495 atg16l1,LOC107689588,LOC107551872 coding upstream 66965 39845409 ~ 39863181 (+)
AMCG00009497 NA coding upstream 86282 39839181 ~ 39843864 (+)
AMCG00009503 NA coding downstream 29016 39967297 ~ 39982047 (+)
AMCG00009510 polr2d,rpb4,LOC106612892,LOC107671669 coding downstream 83800 40022081 ~ 40025439 (+)
AMCG00009512 NA coding downstream 90511 40028792 ~ 40029460 (+)
AMCG00009509 NA coding downstream 132958 40071239 ~ 40072287 (+)
AMCG00009515 NA coding downstream 202188 40140469 ~ 40142280 (+)
G57401 NA non-coding upstream 54976 39874881 ~ 39875170 (+)
G57378 NA non-coding upstream 123218 39806583 ~ 39806928 (+)
G57329 NA non-coding upstream 470470 39459398 ~ 39459676 (+)
G57287 NA non-coding upstream 623372 39306488 ~ 39306774 (+)
G57286 NA non-coding upstream 623916 39303337 ~ 39306230 (+)
G57428 NA non-coding downstream 2941 39941222 ~ 39943036 (+)
G57457 NA non-coding downstream 92265 40030546 ~ 40033333 (+)
G57523 NA non-coding downstream 221128 40159409 ~ 40159626 (+)
G57544 NA non-coding downstream 401101 40339382 ~ 40343381 (+)
G57597 NA non-coding downstream 890791 40829072 ~ 40829677 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other upstream 493129 39434900 ~ 39437017 (+)
G57105 NA other upstream 1472554 38442255 ~ 38457592 (+)
AMCG00009428 NA other upstream 2313450 37608305 ~ 37616696 (+)
AMCG00009429 NA other upstream 2325022 37530822 ~ 37605124 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other upstream 2466641 37422017 ~ 37463505 (+)
G57430 NA other downstream 9725 39948006 ~ 39949200 (+)
AMCG00009516 NA other downstream 148193 40086474 ~ 40105052 (+)
G57604 NA other downstream 1052521 40990802 ~ 40994659 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other downstream 1657948 41596229 ~ 41599124 (+)
G57830 NA other downstream 2097737 42036018 ~ 42078241 (+)

Expression


Co-expression Network