AMCG00009511


Basic Information

Item Value
gene id AMCG00009511
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 40001063 ~ 40004644 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009511
TCCTCTTCCTATTTGTTTGCAGTCGCCGTGGGCTCTGATAGGATTTCGGACATTGCGGTCGAGAGCAAGGCAGAGAAGAGGAAGCGAGAGTCTGGAGACAATGGCACAGAGCAAGAGTTGGGGGAAAAGAAAGTTTGTAAAGGAATCCCCAGATTGAAGGGATACGTTGCGGCgcggagaggagagagggaggagatgcAGGACGCTCACACTCTTCTGCCCGACCTGTCTGCCCACGTCTCCTCACTGCCTCCCCAAGTGTCTCGCCTGGCATACTTTGCGGTCTTTGACGGGCATGGGGGAAGCAGGGCATCCAGGTTTGCTGCAGAAAATCTCCACCTCAACCTGTCTCAGAAGTTCCCGAAAGGTGAGGTCGAAAACCTTGACAAGCTGGTGAAGAAGTGCCTGCTGGAGACTTTCAAACAGACGGACGAAGATTTCCTCAAGCACGCCTCCAGTCAAAAGCCAGCATGGAAGGATGGCTCCACGGCTACCTGCATGTTTGTGGTTGACGACGTTGTGTATGTGGCCAACCTGGGGGACAGTAGGGCCGTGCTGTGCCGGGGCGGAGGGGAGGTCGGCGGGACGTTCTCCACGCTGGCTCTCAGCAGAGAGCACAACCCCACCTGCTACGAGGAGAGGATGAGGATCCAAAAGGCGGGGGGCACTGTCAGGTGA

Function

GO: NA

KEGG:

id description
K17500 ILKAP; integrin-linked kinase-associated serine/threonine phosphatase 2C

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009511 True 678 mRNA 0.57 6 40001063 40004644

Neighbor

gene id symbol gene type direction distance location
AMCG00009513 ilkap coding downstream 4885 39986740 ~ 39996178 (-)
AMCG00009508 NA coding downstream 35940 39953417 ~ 39965123 (-)
AMCG00009507 NA coding downstream 49529 39941212 ~ 39951534 (-)
AMCG00009500 NA coding downstream 118828 39876059 ~ 39882235 (-)
AMCG00009501 NA coding downstream 173693 39819733 ~ 39827370 (-)
AMCG00009523 NA coding upstream 22024 40026668 ~ 40027183 (-)
AMCG00009519 wdr33,LOC107695163,LOC107737411 coding upstream 25879 40030523 ~ 40042216 (-)
AMCG00009522 wdr33,LOC107705313,LOC107653512 coding upstream 47507 40052151 ~ 40068249 (-)
AMCG00009517 NA coding upstream 101479 40106123 ~ 40118728 (-)
AMCG00009518 LOC103034503,LOC107683000 coding upstream 155578 40160222 ~ 40167501 (-)
G57400 NA non-coding downstream 126834 39873971 ~ 39874229 (-)
G57379 NA non-coding downstream 194136 39806635 ~ 39806927 (-)
G57354 NA non-coding downstream 412152 39588686 ~ 39588911 (-)
G57351 NA non-coding downstream 412989 39580611 ~ 39588074 (-)
G57244 NA non-coding downstream 917639 39081421 ~ 39083424 (-)
G57524 NA non-coding upstream 154753 40159397 ~ 40159608 (-)
G57545 NA non-coding upstream 334703 40339347 ~ 40343479 (-)
G57596 NA non-coding upstream 716787 40721431 ~ 40777084 (-)
G57600 NA non-coding upstream 928321 40932965 ~ 40933210 (-)
G57858 LOC103374679,LOC100699862,LOC108250355,LOC107390564,LOC106535138,LOC106904453 non-coding upstream 2168614 42173258 ~ 42175707 (-)
AMCG00009472 NA other downstream 1163469 38827965 ~ 38837594 (-)
G57155 dner other downstream 1418243 38580285 ~ 38582820 (-)
AMCG00009437 NA other downstream 2092095 37889502 ~ 37908968 (-)
AMCG00009417 NA other downstream 2525028 37467254 ~ 37476035 (-)
AMCG00009408 NA other downstream 2606075 37285576 ~ 37394988 (-)
AMCG00009521 gigyf2,LOC107728389 other upstream 116819 40121463 ~ 40157471 (-)
AMCG00009571 LOC107087052,LOC105890629 other upstream 1809915 41814559 ~ 41826934 (-)
AMCG00009582 NA other upstream 2036555 42041199 ~ 42056128 (-)
G58025 NA other upstream 2644206 42648850 ~ 42673707 (-)
G58333 NA other upstream 3477777 43482421 ~ 43945297 (-)

Expression


Co-expression Network