AMCG00009515


Basic Information

Item Value
gene id AMCG00009515
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 40140469 ~ 40142280 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009515
ATGGCTGCCAAAAGGAACGAGGTGGACAGGAAAGCTGCGGCGCCCCTGATGTCCCTGCGCCGCCAGAGACTCGTCACCAAGGATGGCCGCTGCACCCTGAGGACGGGCAGCCGAGCCAAGGGGCTGCTGTATCTGCAGGACATCTGGAGCACGCTGGTGGACCTGCGCTGGCGTTGGGTCCTCCTGGCCTTCTGCACCTCCTTTGTGGCCCACTGGCTGCTGTTCGCCTGTCTGTGGTACCTGCTGGCGCACTTGAATGGGGACCTAGGGGTGGACCACGACAACCCCCCCGCTGaccacattgtgtgtgtgaagtacATCACCAGCTTCACGGCCGCTTTCTCCTTTTCCCTGGAGACACAGCTCACCATCGGCTACGGCACCATGTTCCCAAGCGGAGACTGCCCCAGCGCCATCGCTCTCCTGGCTGTGCAGATGTTACTGGGACTCATGCTGGAGGCTTTCATCACAGGTGCCTTCGTTGCGAAGATAGCCAGACCAAAGAAGCGGGCTGGAACCATCAAGTTCAGCGCATCAGCCGTGGTGGGGCACCACGAGGGCGAGACCTGCGTGATGTTCCGTGCCGCGAACATGCGTGACAGCCCGCTCACCGATGTGCGGGTGAGTGCCATTCTGTACCAGGAGCGCGAGGACCAGACGCTGCACCAGACCAGCGTGGAGTTCCACTTGGACAGGCTTGCGGGCCACAAGTGCCCTTTCTTCATCTTCCCCCTGACCTTCTACCACCCCCTCACCCACTACAGCCCCCTGTACTCCGCCCTGCGGGAGGGCAACCCGGCGCACTTTGAGCTGGTTGTCTTCCTGTCGGCTGCCCAGGAGGGCACCGGCGAGAGCTGCCAGAAGCGAACTTCCTATCTAAGGTGTGAGATTGATGTTGACCACCATTTCGCAAACGTCCTGGGGCTCGACCCGGAGGGCTCTTATGAGGTGAACGTAGCCAACCTCAGCAAGGTGCTGCCTGACCGTGCTCAGACCAAAGCGGAAGGTGAGAAGGATTTTGTAGTTCAATTAAACGGGGATGGTAATGACGGCATAGCAGGATAA

Function

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0006813 potassium ion transport biological_process
GO:0016020 membrane cellular_component
GO:0005244 voltage-gated ion channel activity molecular_function

KEGG:

id description
K05006 KCNJ13, KIR7.1; potassium inwardly-rectifying channel subfamily J member 13

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009515 True 1065 mRNA 0.60 2 40140469 40142280

Neighbor

gene id symbol gene type direction distance location
AMCG00009509 NA coding upstream 68182 40071239 ~ 40072287 (+)
AMCG00009512 NA coding upstream 111009 40028792 ~ 40029460 (+)
AMCG00009510 polr2d,rpb4,LOC106612892,LOC107671669 coding upstream 115030 40022081 ~ 40025439 (+)
AMCG00009503 NA coding upstream 158422 39967297 ~ 39982047 (+)
AMCG00009505 NA coding upstream 202188 39930146 ~ 39938281 (+)
AMCG00009514 rpp21,LOC107653575,LOC107588084 coding downstream 30686 40172966 ~ 40179050 (+)
AMCG00009525 LOC106584350,LOC105907042,LOC106599532 coding downstream 46861 40189141 ~ 40203113 (+)
AMCG00009524 NA coding downstream 70368 40212648 ~ 40220369 (+)
AMCG00009530 NA coding downstream 269933 40412213 ~ 40420872 (+)
AMCG00009529 NA coding downstream 294047 40436327 ~ 40441597 (+)
G57457 NA non-coding upstream 107136 40030546 ~ 40033333 (+)
G57428 NA non-coding upstream 197433 39941222 ~ 39943036 (+)
G57401 NA non-coding upstream 265299 39874881 ~ 39875170 (+)
G57378 NA non-coding upstream 333541 39806583 ~ 39806928 (+)
G57329 NA non-coding upstream 680793 39459398 ~ 39459676 (+)
G57523 NA non-coding downstream 17129 40159409 ~ 40159626 (+)
G57544 NA non-coding downstream 197102 40339382 ~ 40343381 (+)
G57597 NA non-coding downstream 686792 40829072 ~ 40829677 (+)
G57599 NA non-coding downstream 790687 40932967 ~ 40933210 (+)
G57690 NA non-coding downstream 1357684 41499964 ~ 41500218 (+)
AMCG00009516 NA other upstream 35417 40086474 ~ 40105052 (+)
G57430 NA other upstream 191269 39948006 ~ 39949200 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other upstream 703452 39434900 ~ 39437017 (+)
G57105 NA other upstream 1682877 38442255 ~ 38457592 (+)
AMCG00009428 NA other upstream 2523773 37608305 ~ 37616696 (+)
G57604 NA other downstream 848522 40990802 ~ 40994659 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other downstream 1453949 41596229 ~ 41599124 (+)
G57830 NA other downstream 1893738 42036018 ~ 42078241 (+)
AMCG00009647 NA other downstream 3294710 43436990 ~ 43444420 (+)
G58324 NA other downstream 3790672 43932952 ~ 43935762 (+)

Expression


Co-expression Network