AMCG00009520


Basic Information

Item Value
gene id AMCG00009520
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 40178486 ~ 40180235 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009520
ATGTCTGGACTGAACGTCTCCCTGGGCTACTTCTTGGTAGTCGTCGTCCTCAGCGAGGTTGCAGCGTTCCTGCTAAGGCTTGGCCCGGTCTGGGGCTTTTCCGCCGAGCTCCCTGTATCTTTCATGTTAGTAGCCTGCTGGTCGGAGTTGGGAACCTTAAAAGATGTGGGGTTGTGGGCAGGAGGCTTTGGCCCCGATGTCACTTTGACTCTGCTGTTCTTGGTGTTGATGACCCACAGTATCATCTCCCGAGGGGCCTCCGGGAACCCAGCCATGACCCTGCGGAGTTTCCTGCTGTCAGACACTTCAGCTCTGAGCACTCTCTCTTGTCTCGCTGGTCAGTTCACCGGAGCCTACTTGGGTCGATTCTTCGCCACCTACTACTGGTCCTTGGAGCTGACTGACATGCACATGATCCAGAACATGATGTCGTCCGAGTGCAGCCCATCTCTGCGCGTCTCTTTGTCGCAGGGTGCGTTCACAGAGGGGATATGCACCCTGACTTTCCACCTACTTGCCATGCGGCTTAGTGGCAGTCCTGTGCTGTGCAGAGTGCCACTCACCGCGCTCGCCATCACAGCACTCTCGTACGCAGCCGGCGGCTACACCTCTGGTTACTTCAACCCCGCCCTGGCTTACGCCCTGACGTTCAACTGTCCGGGGTTTACTCTGATAGAGTATGCTGCGGTGTACTGGCTTGGCCCACTGGCTGGAATGACTTTGGCACTGTTTCTATACACTGGTCACATTCCTCGACTTTTTGCACGGAACCTCCTCTACTCCCAGAAAAGCCGCTACAGAGTCCCTGTGGGGAAGAGCTCTCCGGACCAGATGGGGAGGACTGGTACTAAGCAGGGGGGCAAAAAGGGCGACTGA

Function

GO: NA

KEGG:

id description
K09871 AQP12; aquaporin-12

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009520 True 876 mRNA 0.57 3 40178486 40180235

Neighbor

gene id symbol gene type direction distance location
AMCG00009518 LOC103034503,LOC107683000 coding downstream 10985 40160222 ~ 40167501 (-)
AMCG00009517 NA coding downstream 59758 40106123 ~ 40118728 (-)
AMCG00009522 wdr33,LOC107705313,LOC107653512 coding downstream 110237 40052151 ~ 40068249 (-)
AMCG00009519 wdr33,LOC107695163,LOC107737411 coding downstream 136270 40030523 ~ 40042216 (-)
AMCG00009523 NA coding downstream 151303 40026668 ~ 40027183 (-)
AMCG00009528 NA coding upstream 277572 40457807 ~ 40472602 (-)
AMCG00009527 NA coding upstream 292401 40472636 ~ 40480067 (-)
AMCG00009531 NA coding upstream 301441 40481676 ~ 40493252 (-)
AMCG00009532 NA coding upstream 314964 40495199 ~ 40495887 (-)
AMCG00009537 NA coding upstream 579660 40759895 ~ 40833267 (-)
G57524 NA non-coding downstream 18878 40159397 ~ 40159608 (-)
G57400 NA non-coding downstream 304257 39873971 ~ 39874229 (-)
G57379 NA non-coding downstream 371559 39806635 ~ 39806927 (-)
G57354 NA non-coding downstream 589575 39588686 ~ 39588911 (-)
G57351 NA non-coding downstream 590412 39580611 ~ 39588074 (-)
G57545 NA non-coding upstream 159112 40339347 ~ 40343479 (-)
G57596 NA non-coding upstream 541196 40721431 ~ 40777084 (-)
G57600 NA non-coding upstream 752730 40932965 ~ 40933210 (-)
G57858 LOC103374679,LOC100699862,LOC108250355,LOC107390564,LOC106535138,LOC106904453 non-coding upstream 1993023 42173258 ~ 42175707 (-)
G57873 NA non-coding upstream 2025035 42205270 ~ 42205559 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 21015 40121463 ~ 40157471 (-)
AMCG00009472 NA other downstream 1340892 38827965 ~ 38837594 (-)
G57155 dner other downstream 1595666 38580285 ~ 38582820 (-)
AMCG00009437 NA other downstream 2269518 37889502 ~ 37908968 (-)
AMCG00009417 NA other downstream 2702451 37467254 ~ 37476035 (-)
AMCG00009571 LOC107087052,LOC105890629 other upstream 1634324 41814559 ~ 41826934 (-)
AMCG00009582 NA other upstream 1860964 42041199 ~ 42056128 (-)
G58025 NA other upstream 2468615 42648850 ~ 42673707 (-)
G58333 NA other upstream 3302186 43482421 ~ 43945297 (-)
AMCG00009672 NA other upstream 3809276 43989511 ~ 43995654 (-)

Expression


Co-expression Network