AMCG00009524


Basic Information

Item Value
gene id AMCG00009524
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 40212648 ~ 40220369 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009524
ATGTCCATGAGCTCTTCAACACGTTGGCAGCCATTGTTCCCCTTCGATTGCTTGATTGCGCTCGTTCTCATCTCTGTTGAGAGATCGTCCTCTGGAGTCTTCGGGGTCAACGCCAATGATGTCATGGTGCCGGAGTTTCCTTCTCAGAAACACCCCCAAAATCAGTCTGGAAACACCTTCCAGTCGCTCGTCTCCTTCACCCGGAACCACACCTGCTCCCTGTTTGACAGCGCGTATGAGGCCCTGGCCCATGACGCCCGGGCGCACGTGACAGAGCTCTTCACTGACCTGTCGCTCTACATCCTGGGTGCCAACACCACGGTGGAGGGGGCTGTCCAACGCTTCTACGACAATCTCTTCCCCCTGGTCTACAACCGACTGGTCAACCCGGGCATCGCTGAACTGAGCCTGGAGCACAGCGAGTGTCTGCGCATGACCCGGCACGACGTCAACCCTTTCGGCCCGCACCCCCGGGCGCTGGTCCAGGAGCTGGCGCGCTCGCTACGTGCCGGGCGGGCCCTCAGCCAGGCCTTGAGCGTGGGTGCTGAGGTGATGAACATCACCGAGCACATGGCGCTGAGCAGAGAGTGTGGACGGGCGCTGGTACGCATGCAGTACTGTTCGCACTGTCAGGGCCTCACCCTCATCAAGCCCTGCGTGGGCTACTGCCACAACGTGATCCGCGGCTGCCTGGCCAGCCTCTCCGAGCTCGACCGGCCTTGGCGGCAATACATCTCCACCCTGGAGGAGCTCACCAACGCCATGGCGGGCGCCCACGACTTGGAGCTGGCGCTGCTGGGCATTCGCAACCAGGTCAATGACGCCATCCTCTACACTCAGCTGCATGGACCCCGGCTCACCGCCACAGTGAGTGCCCGTCCCATTCCCGAGCCCCGCACCACTTCTCATCTCAGCAGCAGGCCTCTATCTGAAACCTGGTCCCGCCAACAGACAAGAGCTGGGGTGACTCGGGGGGAGGTGGCCCCTCTGGTGTTACAGGGCAATCGGAAGCAGCAGGGTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009524 True 1023 mRNA 0.62 3 40212648 40220369

Neighbor

gene id symbol gene type direction distance location
AMCG00009525 LOC106584350,LOC105907042,LOC106599532 coding upstream 9535 40189141 ~ 40203113 (+)
AMCG00009514 rpp21,LOC107653575,LOC107588084 coding upstream 33598 40172966 ~ 40179050 (+)
AMCG00009515 NA coding upstream 70368 40140469 ~ 40142280 (+)
AMCG00009509 NA coding upstream 140361 40071239 ~ 40072287 (+)
AMCG00009512 NA coding upstream 183188 40028792 ~ 40029460 (+)
AMCG00009530 NA coding downstream 191844 40412213 ~ 40420872 (+)
AMCG00009529 NA coding downstream 215958 40436327 ~ 40441597 (+)
AMCG00009526 NA coding downstream 228450 40448819 ~ 40462899 (+)
AMCG00009533 LOC107384019,LOC106568850 coding downstream 386767 40607136 ~ 40608113 (+)
AMCG00009534 LOC106599529,LOC105018039 coding downstream 424025 40644394 ~ 40652818 (+)
G57523 NA non-coding upstream 53022 40159409 ~ 40159626 (+)
G57457 NA non-coding upstream 179315 40030546 ~ 40033333 (+)
G57428 NA non-coding upstream 269612 39941222 ~ 39943036 (+)
G57401 NA non-coding upstream 337478 39874881 ~ 39875170 (+)
G57378 NA non-coding upstream 405720 39806583 ~ 39806928 (+)
G57544 NA non-coding downstream 119013 40339382 ~ 40343381 (+)
G57597 NA non-coding downstream 608703 40829072 ~ 40829677 (+)
G57599 NA non-coding downstream 712598 40932967 ~ 40933210 (+)
G57690 NA non-coding downstream 1279595 41499964 ~ 41500218 (+)
G57770 NA non-coding downstream 1529186 41749555 ~ 41750144 (+)
AMCG00009516 NA other upstream 107596 40086474 ~ 40105052 (+)
G57430 NA other upstream 263448 39948006 ~ 39949200 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other upstream 775631 39434900 ~ 39437017 (+)
G57105 NA other upstream 1755056 38442255 ~ 38457592 (+)
AMCG00009428 NA other upstream 2595952 37608305 ~ 37616696 (+)
G57604 NA other downstream 770433 40990802 ~ 40994659 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other downstream 1375860 41596229 ~ 41599124 (+)
G57830 NA other downstream 1815649 42036018 ~ 42078241 (+)
AMCG00009647 NA other downstream 3216621 43436990 ~ 43444420 (+)
G58324 NA other downstream 3712583 43932952 ~ 43935762 (+)

Expression


Co-expression Network