AMCG00009527


Basic Information

Item Value
gene id AMCG00009527
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 40472636 ~ 40480067 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009527
ATGCCCTCTTCCACCGGCTCGGCCGCAGGGACAGAAGTCCAGGACTGTCCCGCTTGTGGCCCCGGAGAGCAGGCCGCCCGGCGGGGGCGCTACACCGGGGCCAGCGTGGGCGGACAGAAGCACGGGGCAGGGGTGCAGGAGTGGCCGGACAGCTCCAGGTATGAGGGGCAGTTCGTGGATGGCCTGAAGCATGGCACCGGGGCCTTTACTTGGAGCAACGGGGAGGTGTACAAGGGGGAGTTCTTTAAGGACTACCGCCATGGCCATGGGACGTACTCCTGGCCAGGGGGCTGCAGCTTCACCGGGTCATTCTACCTGAACCGCAAGGAAGGCTATGGGACTCTGCAGCTGCCCGACGGGACGACCTTTCAGGGGCTGTACCGGGCGGACGAGCGTTTTGGGCCAGGCGTGCTGACGTACCCCGACGGGCGGCAAGATGTGGGCCTGTGGCACCGGGAACGCCTATTGAAGCTGTGCACCCGCCTCCCGGGGGCCTTCAGCCTGCACGACTTCCCTGAACACCAAGCGAGCCTGGGGCCCAGGGACGAGATCTCACAGGAGCCAGAGAGGGCGTATGAGACCCAGGCAGCCACCAAACCCTTCTACTACGCCTACATGAAGCTTCTGGAGGACGAGCGCTTCATGCTTCCTCCCGAGATTGTTAGCTACTCCTCCGACTCCGACCACCTGCCCCTCCCCCAGTCTCTGCGGAGGGAACTCGACGAACGCTTTTTTGGAGAGCATTGCTGTGACACTGAGTCCATGCCCACGGTCTTGGATTCGCTCCCTCTTCAGCTTCGTATTCGGGGTCACATCCGCAGACACAGGCTGGGGGCCGAGGGGCTGGACTGGGACGTGGCCGCGGTGCTGTCCGGGAGGCGGGAGGCATTCGGACCCAAAGGCCCGTTGGAGGTGAACTCCGAGAGGCTGATCCAGGAGGCGTCGGAGGGAGATCCCCTGAGTGTGTACACTATCCTGCGAGGCGGCCTGGCACACCCTGACGTTGGCGATGCCCGGGGCCACACTCCTCTCATCGCTGCTGCTGTGAACTGTCACAATGATGTCATCAACATCCTACTGAACAGCGGGGCCGACGTGAATCAACTGAGCGATGAGGGGCTGTCGGCGCTGGCGGTGTGCCACGTGCTCTACTACCCCTCACACACTTTCCACAGCAACATGGCCGAAGGACTGGACCGCGATGGGCAGGTTCGCGACGGCCGCATCCATTTGGGCTCTGTCTCCTGGCCCCAGCCCGGGACAGAGTGTGCAGCGGGAGGCCTAGATGTGAAGGAGAGCCCAGATGACCCCGTCTTTGACTCAGCCCGCAGCCTGGCCAGCTTTCACATTGACGTGACCGAGGATGCCCTGCAGCAGACTGCCGAGGCGCTGAGCCGCAACAGCCTGGCCCAGCGCTCCATCAGCGAGGAGACCGTCAGGAGGATGGCACTGATGAAGGCAGAGCACAGGAACAGGTGGGCCACCATCAAGCTGCTGCTGTGCAGAGGTGCGGACCCCAACGCCTCCTCGGTGCCCATGCCCGTCCTCTTCCTCGCCATCAAGGCCGGGCACGTCCAGGCCGTGCGCCGCCTGTTGCAGTGTGGAGCCAGGACCGACGTGCCCCTGCCAAAGAGGCAAAAGGGCTTGTACCCTCTGCATATCGCGGCCGCCCTGCCTGGCAAAGAAGGGGTTAAGATCACAGAGCTCTTGCTGCACGCGGCGGCCAACCCGGATGTGCGAGCCCAGGATGCAGAGGACGTCTTCTCGCTTGATAAGGTCTCCAGTTCGCATCCTCCCCTTGGCTTCAGCATGAAGTCAACCACCCCCCTCGGACCCCCCGTCCAGTACTACAGCCCCCCGGACAAGCTACCTGAGGAGGGCGGTAGGACACCCCTGCACATTGCCTGTCAGCGGGACATCCACTACACCAACGCGAGGGAAGTCATCTCTCTCCTGTTGTGCCACAAGGCCGATCCCAACCTGCTCTGGAGCGGccactctcccctctccctggcCATCGCTAGCGGCAATGACGATGCTATAGATGAGCTCCTGGCCGGGGGCGCGGACCCCAATCTCCCCCTGTCTGGCTGCGTGGGCAGCGCGCTCTGTGCCACCGCTAACATCTACTACGATCCCTACCGCAGCCCACGCCAAACTGCCACACTGATAGACAAATTGGTCAACGCTGGAGCCAACATACTGATGCCAGTGGTGATCGGAGAGGGACGCAAGACTGTGATGGGTACTGCGGTGGACTACGCCTACTACGCCTTCTACCAGGACCGGCGGATCGCCCACACCCCGTACCACGCCCTCAGCGCCAAGGAGAGGGAGGTGTTCAATGGCCGGAGGGAGCTCCTCGCCCTCATGGGAGACCTGCTGCGCCAGGCGGCCGTCGGGAAGGAGCGGGAAAGGCTGGAGagggagctggagctggggatAGCGAGTGGGTACCTGTGCTTCTTCCCAAACAGCAGAAACATGCGACAAACACGAGTgtGCGTGACGCCGTGGGGCCGCCGGGCGGTGACGAGCTATGGCACTGGTGAAATCAGCTGA

Function

GO: NA

KEGG:

id description
K24631 ANKMY1, ZMYD13; ankyrin repeat and MYND domain-containing protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009527 True 2562 mRNA 0.63 14 40472636 40480067

Neighbor

gene id symbol gene type direction distance location
AMCG00009528 NA coding downstream 34 40457807 ~ 40472602 (-)
AMCG00009520 NA coding downstream 292401 40178486 ~ 40180235 (-)
AMCG00009518 LOC103034503,LOC107683000 coding downstream 305135 40160222 ~ 40167501 (-)
AMCG00009517 NA coding downstream 353908 40106123 ~ 40118728 (-)
AMCG00009522 wdr33,LOC107705313,LOC107653512 coding downstream 404387 40052151 ~ 40068249 (-)
AMCG00009531 NA coding upstream 1609 40481676 ~ 40493252 (-)
AMCG00009532 NA coding upstream 15132 40495199 ~ 40495887 (-)
AMCG00009537 NA coding upstream 279828 40759895 ~ 40833267 (-)
AMCG00009538 NA coding upstream 353297 40833364 ~ 40851566 (-)
AMCG00009540 NA coding upstream 512380 40992447 ~ 40994537 (-)
G57545 NA non-coding downstream 129157 40339347 ~ 40343479 (-)
G57524 NA non-coding downstream 313028 40159397 ~ 40159608 (-)
G57400 NA non-coding downstream 598407 39873971 ~ 39874229 (-)
G57379 NA non-coding downstream 665709 39806635 ~ 39806927 (-)
G57354 NA non-coding downstream 883725 39588686 ~ 39588911 (-)
G57596 NA non-coding upstream 241364 40721431 ~ 40777084 (-)
G57600 NA non-coding upstream 452898 40932965 ~ 40933210 (-)
G57858 LOC103374679,LOC100699862,LOC108250355,LOC107390564,LOC106535138,LOC106904453 non-coding upstream 1693191 42173258 ~ 42175707 (-)
G57873 NA non-coding upstream 1725203 42205270 ~ 42205559 (-)
G57982 NA non-coding upstream 1988118 42468185 ~ 42468759 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 315165 40121463 ~ 40157471 (-)
AMCG00009472 NA other downstream 1635042 38827965 ~ 38837594 (-)
G57155 dner other downstream 1889816 38580285 ~ 38582820 (-)
AMCG00009437 NA other downstream 2563668 37889502 ~ 37908968 (-)
AMCG00009417 NA other downstream 2996601 37467254 ~ 37476035 (-)
AMCG00009571 LOC107087052,LOC105890629 other upstream 1334492 41814559 ~ 41826934 (-)
AMCG00009582 NA other upstream 1561132 42041199 ~ 42056128 (-)
G58025 NA other upstream 2168783 42648850 ~ 42673707 (-)
G58333 NA other upstream 3002354 43482421 ~ 43945297 (-)
AMCG00009672 NA other upstream 3509444 43989511 ~ 43995654 (-)

Expression


Co-expression Network