AMCG00009528


Basic Information

Item Value
gene id AMCG00009528
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 40457807 ~ 40472602 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009528
ATGTGGTGCCATGACCGGGCTTTAGCAGGGGAGAAGGGCCACCCAGTGAAACAGGGCTTTTGGTCGACGGAGATGGGCAACTCTGACCCACAATCTCATTTCAGAAGTCTGTTAGAAATGAAGCCGCTGTTCAAGTACTGCTACCAGTGCGGGCGGACCATGGGGGTGCAGCTGGCGGCATGCAGCCGCTGCCACGAGGTCTTCTACTGCAGCAAGGCCTGCAAGATGAAGGCCTGGAGCGAGCGCCACAAGGACGAGTGTCTCCGTGTCACAGGCTGTCCCAGTGACAAGCCAGTCTGGAGAGAAAACCCCGCAGGCCAGCAAACCACAGCTGAGAATAAAAGTAAGGCCAGGGACGCCCAGAGTGCCCCGCCGAAGCCCAAGACACAGCAGCGTCCAGACCCCAGCCAAGGAAATACAGGGCGGTGTGTGGTTGCCGAGAACATTGGCAGGGTATTAAAGGAATACATAAATGTCACTATTCACACCATCAAACAGCAGTGCGGCATTGTTGTGCTGAGGACTAGGCAACAGATGCCCAGTGAGATTCAGGAGTTAGTGTGGCTCTGCAAGCTGAAGATCGGGGCCAATCCAAACCCCCGAATGCACAAAGCCCACTGGACACTTATGGCCAGCCCAGGTGGCGAGGGGACCCTGGCCCTTCGCGATTGTTGGCGGGTGAAGGCTGTGACAGGATCGAGTGGGGAGCCGAGGCGATACTTCAGCTTGAAGTGCGTGGTCTCACAGGGGACGGGCCTACAGTCAAGCTGTTCGCAGTTCAATACAAATCACTCCCGTTGCCAGGAGCAGTATTCCCTCTGTGCCACGGCCCGGAGCTTCCCTGTGTTTCAACAATGCGCCGTGCTGCTCCTCTTCGTGAATAGCCCAACCCTTTGCCCCTCCCCTAACCCACCCAGCCCCGATGCCCGTCTGACCCCGTTCCCTGACTCAGTCCCGATTGGTGCCGTCGCCTGCCGATTACCGCCTGAGGAGCAGCGTGGCCAAcgagaggagcaggaggagcgCGGTGCAGGGCAGGTTCTGGCTTCCCGAGTTGTCCGTGACCTTCTTGTTCTCGGGGGGAATTGCGTACAGCTTCGGTCGGTCTGTGTTGGGGATGGCGATGCGTCCGCTTCCCCTGGGGCACAGGTCCTCTGGGCAGGTGGCGCTCCCCGAGCCACTGACATCATCACCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009528 True 1197 mRNA 0.59 8 40457807 40472602

Neighbor

gene id symbol gene type direction distance location
AMCG00009520 NA coding downstream 277572 40178486 ~ 40180235 (-)
AMCG00009518 LOC103034503,LOC107683000 coding downstream 290306 40160222 ~ 40167501 (-)
AMCG00009517 NA coding downstream 339079 40106123 ~ 40118728 (-)
AMCG00009522 wdr33,LOC107705313,LOC107653512 coding downstream 389558 40052151 ~ 40068249 (-)
AMCG00009519 wdr33,LOC107695163,LOC107737411 coding downstream 415591 40030523 ~ 40042216 (-)
AMCG00009527 NA coding upstream 34 40472636 ~ 40480067 (-)
AMCG00009531 NA coding upstream 9074 40481676 ~ 40493252 (-)
AMCG00009532 NA coding upstream 22597 40495199 ~ 40495887 (-)
AMCG00009537 NA coding upstream 287293 40759895 ~ 40833267 (-)
AMCG00009538 NA coding upstream 360762 40833364 ~ 40851566 (-)
G57545 NA non-coding downstream 114328 40339347 ~ 40343479 (-)
G57524 NA non-coding downstream 298199 40159397 ~ 40159608 (-)
G57400 NA non-coding downstream 583578 39873971 ~ 39874229 (-)
G57379 NA non-coding downstream 650880 39806635 ~ 39806927 (-)
G57354 NA non-coding downstream 868896 39588686 ~ 39588911 (-)
G57596 NA non-coding upstream 248829 40721431 ~ 40777084 (-)
G57600 NA non-coding upstream 460363 40932965 ~ 40933210 (-)
G57858 LOC103374679,LOC100699862,LOC108250355,LOC107390564,LOC106535138,LOC106904453 non-coding upstream 1700656 42173258 ~ 42175707 (-)
G57873 NA non-coding upstream 1732668 42205270 ~ 42205559 (-)
G57982 NA non-coding upstream 1995583 42468185 ~ 42468759 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 300336 40121463 ~ 40157471 (-)
AMCG00009472 NA other downstream 1620213 38827965 ~ 38837594 (-)
G57155 dner other downstream 1874987 38580285 ~ 38582820 (-)
AMCG00009437 NA other downstream 2548839 37889502 ~ 37908968 (-)
AMCG00009417 NA other downstream 2981772 37467254 ~ 37476035 (-)
AMCG00009571 LOC107087052,LOC105890629 other upstream 1341957 41814559 ~ 41826934 (-)
AMCG00009582 NA other upstream 1568597 42041199 ~ 42056128 (-)
G58025 NA other upstream 2176248 42648850 ~ 42673707 (-)
G58333 NA other upstream 3009819 43482421 ~ 43945297 (-)
AMCG00009672 NA other upstream 3516909 43989511 ~ 43995654 (-)

Expression


Co-expression Network