AMCG00009531


Basic Information

Item Value
gene id AMCG00009531
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 40481676 ~ 40493252 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009531
GGGAGCCGGGCCGGAGCTCAGGACGCACAGCGCATCCCAGGACCGAGAGCAGCCCGGAGAGCTGGATTTGATGTTGGTAGTGTACGAAGCAGATGAGGGAGACGACACGACCACCGGTCACGGAAAGCCAGATGGGCAGCAGGAAGTGGCCGGATGGCCAGTGCCTATCTCAGCTTGCCTGGTGGGCTCCATAGGGAAAGTCAATGAGAAGATTGCTCATCTCCAACTACTGCCATGCAGACAGCAGCTGATCAACCACAGTGGATATGATGGCCCAAACTGGTCTGAGCCAGACACAAGTGAGAAGATTGGACAGCAGTCCCTTGGGAATACAGagagagatgagaaAGACGTGCAGATGTTCTCATGTGTCTACCAAGAGCAATCCTCACATGCCCTGCAACTGGACATGCAACACAAAAGCAGCCAGAGACTTGAAAAGAGGGATCAGGACAAACCCAAACTTGTGGAAGTGCACCAGTACCCTGGCTTTAGCAAGGAAATGCCAACACCTCTGCCGAACAACATCGCCCTCAACACCATCATGTCCCGGGTGGTTAAAGCTCAGGGGCACCTGGCCAAAAAGCCCAGATACCAGGCGGTGTTTCAGAGTCTGCTGGCCTCACCGGTGATGCAGGACTTACTGCTGGACTCCTTCTGGTGGATATTACTTCAAAACtaccagCCGGATAGCAGCTCTCAGGCTCAGCTGTTCGCGCGGCTCTCTGAGAGTTACGTCCGATTCCTGACCCAGAGTTTGTTCTCGCGCTACGGAGACGTCTTCCTGAAGGAGTTCCCCCAGACTCTGAGCCAGGCGCTGTACTGCTGCTTCTGTTCCTGCTTCCCTCAGTCTGTCACCTCCTTCCACTGCAACGCGTTCCTCTGCCAGCTGTGCCACACGGCCTACCAGTGGGTCGGAGGTATCCGCCCCGCTCCTGACATCTTCGGTCAGTGGGATTTCACGGCTCTCGAGCCTGAAGAAGTGCGGCGAGGGGAGCCGACGTCCGGGTCCGACAAACACAACGCAGGGAGTGGAGTGAGTTGGTCTTTCCTGGACGCCGTCTCCTCCAGCCCCCTCATCTCTCCCCTCCGTTCTCGCAGTCGCCAGCCCAGCTTCACGACGACGCGCGTCGAGAGCAGGAGCTCAGTGTTGTGTCCCAGCTGCCCCAGTCTGGCGAGCATGCGGCCCAAAGGCATGCTGGGAACAAGCAGTTGTGTTTCCATGACAGCAGAACACAGTGAGGTCCAGGTCAAAAAGGCTGAGGTCGAACTGAAGGTCTTCTCCTCCCCGAGCGAGGGAGCGTCTCACTGGCCTGGGACACAGTCCCCCACAGCCTGTCCCGGGCCCCAGTTCCAGAAGTGTGTCTTCAATCTGTGGGGACACAGCCCCCTGGTGCAGTTTTACCTGCAGAGACATCGCGGACACTCACAGACTGGGCTGGACTTTCTAGCCCAGCAGCACGGTGAGGCGCTCCGGAGGGCGGCCAGGGACCTGCAGGCGCAGCACGCCCAAGACCTGGCCAGCCTGCACCGCGCACAGCTGTCCGAGCGGCAGGAGCTCATCAGaaaagagaagaaactgTTGTCTCAAAAACGCACCGTCAAGAGACTGTGCCAACTGCTGGTGCCAGACGATAAAGATGTCGAGGCCAAGTCTCGCTCTGAGGTGGCCCTGGCCTTCGAAGCCGCCCTGCAGGCCCAAGACTGATGCTTACGAGCTGCTAATCGCTGGGCCTGATGGGAGTCCAAAGATTGACCAATCGCTGTGTAGAAATCTGAGCTACTGGGGGGGTGGATGATCAATAaagaatgggaaaataaatcttcG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009531 True 1828 mRNA 0.58 17 40481676 40493252

Neighbor

gene id symbol gene type direction distance location
AMCG00009527 NA coding downstream 1609 40472636 ~ 40480067 (-)
AMCG00009528 NA coding downstream 9074 40457807 ~ 40472602 (-)
AMCG00009520 NA coding downstream 301441 40178486 ~ 40180235 (-)
AMCG00009518 LOC103034503,LOC107683000 coding downstream 314175 40160222 ~ 40167501 (-)
AMCG00009517 NA coding downstream 362948 40106123 ~ 40118728 (-)
AMCG00009532 NA coding upstream 1947 40495199 ~ 40495887 (-)
AMCG00009537 NA coding upstream 266643 40759895 ~ 40833267 (-)
AMCG00009538 NA coding upstream 340112 40833364 ~ 40851566 (-)
AMCG00009540 NA coding upstream 499195 40992447 ~ 40994537 (-)
AMCG00009546 NA coding upstream 641062 41134314 ~ 41137031 (-)
G57545 NA non-coding downstream 138197 40339347 ~ 40343479 (-)
G57524 NA non-coding downstream 322068 40159397 ~ 40159608 (-)
G57400 NA non-coding downstream 607447 39873971 ~ 39874229 (-)
G57379 NA non-coding downstream 674749 39806635 ~ 39806927 (-)
G57354 NA non-coding downstream 892765 39588686 ~ 39588911 (-)
G57596 NA non-coding upstream 228179 40721431 ~ 40777084 (-)
G57600 NA non-coding upstream 439713 40932965 ~ 40933210 (-)
G57858 LOC103374679,LOC100699862,LOC108250355,LOC107390564,LOC106535138,LOC106904453 non-coding upstream 1680006 42173258 ~ 42175707 (-)
G57873 NA non-coding upstream 1712018 42205270 ~ 42205559 (-)
G57982 NA non-coding upstream 1974933 42468185 ~ 42468759 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 324205 40121463 ~ 40157471 (-)
AMCG00009472 NA other downstream 1644082 38827965 ~ 38837594 (-)
G57155 dner other downstream 1898856 38580285 ~ 38582820 (-)
AMCG00009437 NA other downstream 2572708 37889502 ~ 37908968 (-)
AMCG00009417 NA other downstream 3005641 37467254 ~ 37476035 (-)
AMCG00009571 LOC107087052,LOC105890629 other upstream 1321307 41814559 ~ 41826934 (-)
AMCG00009582 NA other upstream 1547947 42041199 ~ 42056128 (-)
G58025 NA other upstream 2155598 42648850 ~ 42673707 (-)
G58333 NA other upstream 2989169 43482421 ~ 43945297 (-)
AMCG00009672 NA other upstream 3496259 43989511 ~ 43995654 (-)

Expression


Co-expression Network