AMCG00009545


Basic Information

Item Value
gene id AMCG00009545
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 41171314 ~ 41175326 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009545
GATCTGGCCAACCCTGCGCACCGTTATAACGAGTGCTGCTTTCTCTGCGCATGCGTGGAAGCCGGCGCTTGCGCAGTGGACGAGATTCAGTAGGATCGTGAGGGCGGCTCGACCGGCGATCTTCATAATGTCAGAAGAACTGAAGTCCACCAACGGCCCCTTGGAACAGTTCATTTTActtgcaaaaaacacaaaaggaccAGCCCTCATTGCTCTCATTAACCAGCTGCTAGAAGCACCAGGAGTCTACGTCTTTGGAGAGTTCCTCAATTTATCCTGTGTGGAGGAACTTTCAAAAGGGCCCAACCAGGGATATTTCCAGCTCTTGAACTTGTTTGCTTACGGCTCGTACGTAGATTACACAGCAAATAAGGACACGCTGCCCGTTTTATCCGATGCTCAGAAGATCAAATTGAAACATCTGACTATTGTCCACTTGGCAGAAAAAATGCAGCAGTGCATTCCGTACTCGGTGCTGATGAGGGACCTCGAGATGCCGACAGTCCGAGCGCTGGAGGACCTGATCATCGACGCCGTCTACACCGACGTCATCCGCGGCAAACTGGACCAGTGCAGACAGCTGCTGGAGGTGGATGACTGCATCGGCCGGGACATCCAGGAACGGGATATCGGCAGCATCACCAACACGCTCAGCCAGTGGTGCGCCGGCTGCGAATCCGTCTCCTCGGCCATCGAGCTGCAGGTCAACAGGGTCACCGAGTGCCGAGCGACTCACCTCAAAACCCAGCAGCAGCTCGAGGCAGAAGTGGCTGAGATCAAGACGACGCTAAAGGCCGCCGCTGCGCCCTCTTCACAGGAGGCCGACCCCCACGTGATGGAGCAAGAGGACGAACCGAGCGGCGAGCGCCAGCCCTGCCTGAAGATGATCACCAAGGTGAAGGAGTTCCTGAACATCCGACACTGAGGCTGCAGGCTGAAGCCACCGCGGCCCGCTTTTTCACAACCGAATAAACGCAAAGAACGGCCAGTGCGTTTATCTTTATTTCTTCTGCTTGCATGCATGTGCATTTGATGCTTGTTCTAGTACTTTCCTAGATTCTGAAATGTGGGTATTAGTTTTCAGCACAAAGTATTAGACATTAGTAATTGTAGTGTGACTGAGAGTGTAGGTGTGGCTCGGACCTGCAGAAATAGTATGTTTTTGTCTATATATagtattcattttgatttttgatCTCTATGAAAtgctctttttgtgttttatatgtcGGTGTTTCATGGTTTCTTGACCTCACGGCCAACTTTAAAGTGGTGAAAACTTATTTGAGCATACATTGAATTTTTGTGTGACTGACtaatgcaagaaaaacaaaaaacaaatctgtgtctGTAGTGGGtaatgtttgctttatttttccattatttcacTTCAAAAGGTCTTCTGTCTCACATTCAAGTTATTCAAAGCAAACAGATTGGAGGTTTTGATGGGATTTGATGG

Function

GO: NA

KEGG:

id description
K12180 COPS7, CSN7; COP9 signalosome complex subunit 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009545 True 1462 mRNA 0.49 7 41171314 41175326

Neighbor

gene id symbol gene type direction distance location
AMCG00009548 NA coding downstream 4078 41159899 ~ 41167236 (-)
AMCG00009547 NA coding downstream 15404 41140440 ~ 41155910 (-)
AMCG00009546 NA coding downstream 34283 41134314 ~ 41137031 (-)
AMCG00009540 NA coding downstream 176777 40992447 ~ 40994537 (-)
AMCG00009538 NA coding downstream 319748 40833364 ~ 40851566 (-)
AMCG00009549 sox14,LOC107679857,LOC103365676,LOC107756185,LOC107713406,LOC100695210,LOC107593189 coding upstream 78496 41253822 ~ 41254538 (-)
AMCG00009553 NA coding upstream 242425 41417751 ~ 41425073 (-)
AMCG00009557 NA coding upstream 322785 41498111 ~ 41501769 (-)
AMCG00009561 yeats2,LOC107578903 coding upstream 340162 41515488 ~ 41542000 (-)
AMCG00009558 LOC107590230,LOC107721905,LOC107663692,LOC107671351,LOC107586738,LOC103026629,LOC108443641 coding upstream 369579 41544905 ~ 41562147 (-)
G57600 NA non-coding downstream 238104 40932965 ~ 40933210 (-)
G57596 NA non-coding downstream 394230 40721431 ~ 40777084 (-)
G57545 NA non-coding downstream 827835 40339347 ~ 40343479 (-)
G57524 NA non-coding downstream 1011706 40159397 ~ 40159608 (-)
G57400 NA non-coding downstream 1297085 39873971 ~ 39874229 (-)
G57858 LOC103374679,LOC100699862,LOC108250355,LOC107390564,LOC106535138,LOC106904453 non-coding upstream 997932 42173258 ~ 42175707 (-)
G57873 NA non-coding upstream 1029944 42205270 ~ 42205559 (-)
G57982 NA non-coding upstream 1292859 42468185 ~ 42468759 (-)
G57988 NA non-coding upstream 1302395 42477721 ~ 42478112 (-)
G57998 NA non-coding upstream 1364113 42539439 ~ 42540113 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 1013843 40121463 ~ 40157471 (-)
AMCG00009472 NA other downstream 2333720 38827965 ~ 38837594 (-)
G57155 dner other downstream 2588494 38580285 ~ 38582820 (-)
AMCG00009437 NA other downstream 3262346 37889502 ~ 37908968 (-)
AMCG00009417 NA other downstream 3695279 37467254 ~ 37476035 (-)
AMCG00009571 LOC107087052,LOC105890629 other upstream 639233 41814559 ~ 41826934 (-)
AMCG00009582 NA other upstream 865873 42041199 ~ 42056128 (-)
G58025 NA other upstream 1473524 42648850 ~ 42673707 (-)
G58333 NA other upstream 2307095 43482421 ~ 43945297 (-)
AMCG00009672 NA other upstream 2814185 43989511 ~ 43995654 (-)

Expression


Co-expression Network