AMCG00009563 (camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774)


Basic Information

Item Value
gene id AMCG00009563
gene name camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 41596229 ~ 41599124 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009563
CGGGAACACAccactgctctctctcactctctctctcttgcacatCTTGAGATCCAAACACGCCCGTGTATCCGTCcatgcacagcacagcacgggAAGACTACATGTCATCATTGCACTGAAAAGGGACTGCAAGAGGACGACACTGCATGCACTTTGTTTTCGGGGATCTACGTTATAAAGAGCGGTTGCATCCATCCTtcgacatttcagttttttcctgtttctacgCTGAGTGCCATTATGTCTGAGATCCTGCCATACAGCGAGGGGAAAATGAGCGGCTATGGAGCAGACAGCGACAGTCAGATTTCCTTCAGCTGTCGGCTGCAAGACACCAACACATTCTTCGGGGCATCTCAAGCAAAAAGACCCCCCAAACTTGGACAGATCGGCAGAGCAAAGCGAGTGGTGATTGAAGATGACCGAATAGACGAGGTCCTGAAGGGCATGACGGACAAGTCCTCACCAGGTGTTTAAATATGACAGAGCCCTTGCAAACTTTTCTTTTCTCACCGGTTTGAAGCACTTTTCGGCTGTGCATGTGTTTGAGGATTGTAAGCAGAGGAGAAGGGACGAAGCGATGAAAGTGGTGACATGAAGGagggggaagaggaagaggaagagaagacGGAAAGAGAGAGCCCGAGATTGATATTGGGGTTGCTGGCAATTCTCCAAACGAAAACCCGATTTCCAAACCACTGCTGGCAGGAAGATGGCAAGATGGCTGATTCGTGCAGCTCCGTCTTTCAGTCTCTGCCTCTGTATAGCGATGGATGGACTTTCCATTTCACGACCATCTTCCAAAATGCGCTGTAAACAACAATAACCACTGGAAGGTGAAACCCATTTCCAGCCCCGTTTCTGTTGCTGTACTATAGCCTGTTTAAGCTCATGTTTCATCCGCGCGTACCattgaaaacacattgaagACGCATTGAAGGGAGCTGTTCTTTCAGCACCGCCTGAACGCAGAAGGCATCCCTATTGATGCTAGAGCTTTTTCTTAGCTGACCAATCACAGacatttcaattgcattttGTGGGAAGACTTGATGTATGTAACGtttgaaaaatatacacaagGACAATAAtactttatgttttgtttttttgtttttgttgggaGCTgcgtttttttaatcaaagtaaaataatttaattatcctATAAGGAGAACCGACGTTTTTcaacgtttttgttttgtaatgaaacTGTACAGCCTTCACAGATTGGCATCCGCACTTCATCCCTTAACTAGTTCTCAATATCGGAAGAGTTTTTCTCATCTAATGCCAGCAGGGATggtaaaaaataacacaaaaaataaataaagaaataatattgaatcaatcaatcaatcaatcaatcaatcaaaatcaaTAATGAGAAAGACTGACAGACAATATTTTTTCTCCATCTCTTTGCATGAACTTCCGATCCCGGTGCCAACGCGGGTGCCACCACCATTCCCACCTATCCTGGCACggttgtttttaacaaaaaaaatcatatttgtatttttatatctaaatatttgttatttaaagttatatGCTAGTCTAACGTCTTACAATTCACCAAGAAAAAAGTACTTTGGGAAGGATATTCAGATTGAGACTAACAGAAGATCTCAGATTTGGTTTTGTCTGTCTCATTCTATATCAAGTATTGGGGGTAATAATGATTACAAGGACTTATTgaatgtgttttggtttttgcaCACATCAATGTAAAACTATTATTAAGAAATACTGTGATTTGGGCTTCGTTGATGGGTTCGTTAGAAATGACAACTTTAGAATTGATTGCACTGTTTACGAGTATCTTCAAATAACACGTTATTTGATCGAGTTTTTGGACAttaaagttgtgtttttatttgatttattttgtaccattCCTCTGAAGAGATAATTAAATATGGTTTGTTGTGCATGAAAccttaatattttcaataatgAAACATCATTTTATGAagcaaaaaagcaacaaaaatgtCATGACATTCTAAGAATGATTCATTGTATATTATGATgccattttcactgtatttggTGAATTAATAAATGGTGAAAGAACACGT
>TU72199
GGATGACTTCACTGTTCCGCCTGGGTTTCCTTTATGATCCCGGGATCTCCCAGTTTTCTCTTCAGACCTCTCCGAGCTCCGGGAACACAccactgctctctctcactctctctctcttgcacatCTTGAGATCCAAACACGCCCGTGTATCCGTCcatgcacagcacagcacgggAAGACTACATGTCATCATTGCACTGAAAAGGGACTGCAAGAGGACGACACTGCATGCACTTTGTTTTCGGGGATCTACGTTATAAAGAGCGGTTGCATCCATCCTtcgacatttcagttttttcctgtttctacgCTGAGTGCCATTATGTCTGAGATCCTGCCATACAGCGAGGGGAAAATGAGCGGCTATGGAGCAGACAGCGACAGTCAGATTTCCTTCAGCTGTCGGCTGCAAGACACCAACACATTCTTCGGGGCATCTCAAGCAAAAAGACCCCCCAAACTTGGACAGATCGGCAGAGCAAAGCGAGTGGTGATTGAAGATGACCGAATAGACGAGGTCCTGAAGGGCATGACGGACAAGTCCTCACCAGGTGTTTAAATATGACAGAGCCCTTGCAAACTTTTCTTTTCTCACCGGTTTGAAGCACTTTTCGGCTGTGCATGTGTTTGAGGATTGTAAGCAGAGGAGAAGGGACGAAGCGATGAAAGTGGTGACATGAAGGagggggaagaggaagaggaagagaagacGGAAAGAGAGAGCCCGAGATTGATATTGGGGTTGCTGGCAATTCTCCAAACGAAAACCCGATTTCCAAACCACTGCTGGCAGGAAGATGGCAAGATGGCTGATTCGTGCAGCTCCGTCTTTCAGTCTCTGCCTCTGTATAGCGATGGATGGACTTTCCATTTCACGACCATCTTCCAAAATGCGCTGTAAACAACAATAACCACTGGAAGGTGAAACCCATTTCCAGCCCCGTTTCTGTTGCTGTACTATAGCCTGTTTAAGCTCATGTTTCATCCGCGCGTACCattgaaaacacattgaagACGCATTGAAGGGAGCTGTTCTTTCAGCACCGCCTGAACGCAGAAGGCATCCCTATTGATGCTAGAGCTTTTTCTTAGCTGACCAATCACAGacatttcaattgcattttGTGGGAAGACTTGATGTATGTAACGtttgaaaaatatacacaagGACAATAAtactttatgttttgtttttttgtttttgttgggaGCTgcgtttttttaatcaaagtaaaataatttaattatcctATAAGGAGAACCGACGTTTTTcaacgtttttgttttgtaatgaaacTGTACAGCCTTCACAGATTGGCATCCGCACTTCATCCCTTAACTAGTTCTCAATATCGGAAGAGTTTTTCTCATCTAATGCCAGCAGGGATggtaaaaaataacacaaaaaataaataaagaaataatattgaatcaatcaatcaatcaatcaatcaatcaaaatcaaTAATGAGAAAGACTGACAGACAATATTTTTTCTCCATCTCTTTGCATGAACTTCCGATCCCGGTGCCAACGCGGGTGCCACCACCATTCCCACCTATCCTGGCACggttgtttttaacaaaaaaaatcatatttgtatttttatatctaaatatttgttatttaaagttatatGCTAGTCTAACGTCTTACAATTCACCAAGAAAAAAGTACTTTGGGAAGGATATTCAGATTGAGACTAACAGAAGATCTCAGATTTGGTTTTGTCTGTCTCATTCTATATCAAGTATTGGGGGTAATAATGATTACAAGGACTTATTgaatgtgttttggtttttgcaCACATCAATGTAAAACTATTATTAAGAAATACTGTGATTTGGGCTTCGTTGATGGGTTCGTTAGAAATGACAACTTTAGAATTGATTGCACTGTTTACGAGTATCTTCAAATAACACGTTATTTGATCGAGTTTTTGGACAttaaagttgtgtttttatttgatttattttgtaccattCCTCTGAAGAGATAATTAAATATGGTTTGTTGTGCATGAAAccttaatattttcaataatgAAACATCATTTTATGAagcaaaaaagcaacaaaaatgtCATGACATTCTAAGAATGATTCATTGTATATTATGATgccattttcactgtatttggTGAATTAATAAATGGTGAAAGAACAC

Function

symbol description
camk2n1a Enables protein kinase binding activity. Acts upstream of or within negative regulation of protein kinase activity. Is expressed in several structures, including brain; eye; heart; liver; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in ovarian cancer; ovarian carcinoma; and prostate adenocarcinoma. Orthologous to several human genes including CAMK2N2 (calcium/calmodulin dependent protein kinase II inhibitor 2).
camk2n2 Enables protein kinase binding activity. Acts upstream of or within negative regulation of protein kinase activity. Is expressed in axial chorda mesoderm; nervous system; notochord; ovary; and somite. Orthologous to human CAMK2N2 (calcium/calmodulin dependent protein kinase II inhibitor 2).

NR:

description
PREDICTED: calcium/calmodulin-dependent protein kinase II inhibitor 2-like

GO:

id name namespace
GO:0006469 negative regulation of protein kinase activity biological_process
GO:0004860 protein kinase inhibitor activity molecular_function
GO:0019901 protein kinase binding molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009563 False 2089 mRNA 0.40 2 41596308 41599124
TU72199 True 2166 lncRNA 0.40 2 41596229 41599122

Neighbor

gene id symbol gene type direction distance location
AMCG00009556 NA coding upstream 7475 41586666 ~ 41588754 (+)
AMCG00009562 NA coding upstream 27397 41560388 ~ 41568832 (+)
AMCG00009554 NA coding upstream 86382 41504994 ~ 41509847 (+)
AMCG00009555 NA coding upstream 97424 41485230 ~ 41498805 (+)
AMCG00009552 NA coding upstream 116233 41476537 ~ 41479996 (+)
AMCG00009564 NA coding downstream 79428 41678552 ~ 41683695 (+)
AMCG00009568 NA coding downstream 176085 41775209 ~ 41784537 (+)
AMCG00009569 NA coding downstream 233747 41832871 ~ 41844457 (+)
AMCG00009575 NA coding downstream 302709 41901833 ~ 41910118 (+)
AMCG00009577 NA coding downstream 352543 41951667 ~ 41960909 (+)
G57690 NA non-coding upstream 96011 41499964 ~ 41500218 (+)
G57599 NA non-coding upstream 663019 40932967 ~ 40933210 (+)
G57597 NA non-coding upstream 766552 40829072 ~ 40829677 (+)
G57544 NA non-coding upstream 1252848 40339382 ~ 40343381 (+)
G57523 NA non-coding upstream 1436603 40159409 ~ 40159626 (+)
G57770 NA non-coding downstream 150431 41749555 ~ 41750144 (+)
G57775 NA non-coding downstream 216797 41815921 ~ 41817795 (+)
G57792 NA non-coding downstream 240041 41839165 ~ 41839466 (+)
G57843 NA non-coding downstream 486155 42085279 ~ 42088145 (+)
G57940 NA non-coding downstream 803111 42402235 ~ 42402452 (+)
G57604 NA other upstream 601570 40990802 ~ 40994659 (+)
AMCG00009516 NA other upstream 1491177 40086474 ~ 40105052 (+)
G57430 NA other upstream 1647029 39948006 ~ 39949200 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other upstream 2159212 39434900 ~ 39437017 (+)
G57105 NA other upstream 3138637 38442255 ~ 38457592 (+)
G57830 NA other downstream 436894 42036018 ~ 42078241 (+)
AMCG00009647 NA other downstream 1837866 43436990 ~ 43444420 (+)
G58324 NA other downstream 2333828 43932952 ~ 43935762 (+)
G58522 NA other downstream 2787373 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 2962653 44561777 ~ 44570531 (+)

Expression


Co-expression Network