AMCG00009566


Basic Information

Item Value
gene id AMCG00009566
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 41649282 ~ 41652922 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009566
ATGGCTGGAGGCTTCATGATAAAGGAGCGATTCCTCCAGGCTGGGCGTCCCGGCCGCTCCCGTGCCGGCGGACAGCGGCTCAGTCAAACAGACCCGCTCACCATGGAGACGGGCTCCACGCTCCCAGCTCCGTCGTgctgTGGGAACAGCTCGATGAGCTTCGATATGTTCAACTGCGGTTATGGCTCCATCGTCAATATCGACTACTCTGTTGTCTGCATCGAGACCATGGCAGCAAAACACGCCCACTGCCCTGGGCTGACGTGGCTGCAAATGGATGCCCGCAAGCTGGCGTTCCCAGAAGACACGTTCGACGTGGTCCTGGAGAAAGGTACGCTTGATGCCATGATGGTGGAAGAGAAGGACCCCTGGAACGTGTCTTCTGAAACAGCCAGCGTACTTCAACAGGTGTTAAAGGAGCAACTCTAG

Function

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0008168 methyltransferase activity molecular_function

KEGG:

id description
K22857 EEF1AKMT4; EEF1A lysine methyltransferase 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009566 True 429 mRNA 0.58 3 41649282 41652922

Neighbor

gene id symbol gene type direction distance location
AMCG00009565 NA coding downstream 39893 41606797 ~ 41609389 (-)
AMCG00009560 NA coding downstream 64821 41574140 ~ 41584461 (-)
AMCG00009559 NA coding downstream 77115 41570613 ~ 41572167 (-)
AMCG00009558 LOC107590230,LOC107721905,LOC107663692,LOC107671351,LOC107586738,LOC103026629,LOC108443641 coding downstream 87135 41544905 ~ 41562147 (-)
AMCG00009561 yeats2,LOC107578903 coding downstream 107282 41515488 ~ 41542000 (-)
AMCG00009567 NA coding upstream 31590 41684512 ~ 41700757 (-)
AMCG00009572 NA coding upstream 134691 41787613 ~ 41788999 (-)
AMCG00009570 NA coding upstream 192098 41845020 ~ 41849637 (-)
AMCG00009573 NA coding upstream 197216 41850138 ~ 41863329 (-)
AMCG00009574 NA coding upstream 214619 41867541 ~ 41874590 (-)
G57600 NA non-coding downstream 716072 40932965 ~ 40933210 (-)
G57596 NA non-coding downstream 872198 40721431 ~ 40777084 (-)
G57545 NA non-coding downstream 1305803 40339347 ~ 40343479 (-)
G57524 NA non-coding downstream 1489674 40159397 ~ 40159608 (-)
G57400 NA non-coding downstream 1775053 39873971 ~ 39874229 (-)
G57858 LOC103374679,LOC100699862,LOC108250355,LOC107390564,LOC106535138,LOC106904453 non-coding upstream 520336 42173258 ~ 42175707 (-)
G57873 NA non-coding upstream 552348 42205270 ~ 42205559 (-)
G57982 NA non-coding upstream 815263 42468185 ~ 42468759 (-)
G57988 NA non-coding upstream 824799 42477721 ~ 42478112 (-)
G57998 NA non-coding upstream 886517 42539439 ~ 42540113 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 1491811 40121463 ~ 40157471 (-)
AMCG00009472 NA other downstream 2811688 38827965 ~ 38837594 (-)
G57155 dner other downstream 3066462 38580285 ~ 38582820 (-)
AMCG00009437 NA other downstream 3740314 37889502 ~ 37908968 (-)
AMCG00009417 NA other downstream 4173247 37467254 ~ 37476035 (-)
AMCG00009571 LOC107087052,LOC105890629 other upstream 161637 41814559 ~ 41826934 (-)
AMCG00009582 NA other upstream 388277 42041199 ~ 42056128 (-)
G58025 NA other upstream 995928 42648850 ~ 42673707 (-)
G58333 NA other upstream 1829499 43482421 ~ 43945297 (-)
AMCG00009672 NA other upstream 2336589 43989511 ~ 43995654 (-)

Expression


Co-expression Network