AMCG00009570


Basic Information

Item Value
gene id AMCG00009570
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 41845020 ~ 41849637 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009570
CAGATGCTTTTTTCTTGGGAGAAAGTGAAGGCTTGCAGAATTCACTGACCAAACAGGAGCAGTTCACACCTAAGCTGCTGGGGGATTGGTGGAAGACGCTGGACCACAGCCGCCATCCCACCATCACTGGACCAACACAGAAACAGCCTCTACACATTTTAGAGAACAGCTTTGTGTCGTTTTGTCACAGTTAACAATATTGCTACATCGTTGTGTGTTATTATCTGGGATCTTATTTGTCTTCTTCATGCACCTGGGAAGATGGAGAGGCAGGACACGACAGCTGCCAGGGGCGAGGACATCCCTCTCAGTGCAAGCGCAGATGTGGAAGGTCTTCAAAGGTCCATGAACATGAACCACTACGCCACGAAGAAGAGCGCGGCGCAAAGCATGCTGGACATCGCGCTGTTGATGGCCAATTCTTCCCAACTAAGAACTGTGCTTCACGAAGGGTCGTCTTACCGATACTATtaccccctcctcttcctcatctcCATGTCAATGTTTCTGCAGGTCATGGTGGGTCTTCTGCTGGTCTTCATAGTTAAGTACGACCTGAACGACGTCAAGAAGCAGCCGAAACTGAACCGCTTGAACAACGCTGCCACAGTTCTGGTGTTCTTCACCGTCCTGGTCAACATCTTCATCACTGCTCTAGGTGTGGAATCTGGTCGGATAGTCCTGATGCCTCATGCCCCATCCTCTGACCCACTCCCTAAGGACACAAATCTAACCCATCTTGACAGCATCTAGGGTTGGGAATGTCTCCATGCCACAGACTGCAGAAGCTGCCTCTTACATTCCATTACCCTTCGGACAAAAAGATATGGCTTTACAAAAAGGGATCAGTCGCTCTTGTTCCCAGGACACTCAGGAATAGCTGgacaattgtaaatgtaatttgagtTAAATTACATTCAGTAGAATAGCTGGGATGCACAACAGATCACTTTGCATTGTGGAAAcggcaaatatataaatacagctgtATAGGATAAGGTAGCAACATCCATCAGCATTGAATGATTGGCTAATTAGACATTATAATGGTTTTATCTATAGTTAATTACTCTATAAAGGGCCATAAAGATAAATTttgaatcaataaaatatgcTCCTACTGGTACTAATAAATAGGGTGAGCAGAAACTTTTGCAGCTCTATCCTCTGTGAGACACTGGTGATGGTTCTGGACATGCCAGTTTTGGAAGTTTTGGGAAAGCGTGCCCTTTCACGAGTCATTGATCTGGCTAGATATTGATCAGGAAAccttgtgtgtatgtaaatggAGGCTGCACCGCAGTAAACATACCATATATAACTTTTATACatctttgtttattgtaaaaatatCTTGTTAAAATATGATGGAACCTGAAAGGGGAAGATCAGGGAAATAATGTTCAAAATGTGCATGtactttgttgttgtgtttttgtactTGCCAGTATAAAATCTGTAAAAGACATGGATGAAAGCTTTGATATTTTACTGTCTTGGTGCACATAGGCATTAAAATAGCATCGCAACGCTTATGTCCGTGTGTTAAAACAGTTTGAAACTAATATTCATGAGCATTGGAAGGCAACGCACAAACATCTGGTTTGTAATCAATGAAGGTGGGCAGTTACTTGTTAACATAGCAAGATGCCTTAACAAGAGTAGTTACCTtactttctgtgtctgtttaaCATGTTCAGCGGGTTTgacatgcagtgttttataGGGCCCTGATGGGAGCGCACATGGGGACTTGAACAGAGGggtaaatgtgtatatatagagcATTTGATATGTGACAGTATACATGTGAATTGAGGCACTTTGTTTAGCCCCAGAACTGTTTTTGTATGAATTGCTTGATATGTATAACTACAggtgttgtaaaataaaatatacattatttgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009570 True 1909 mRNA 0.42 4 41845020 41849637

Neighbor

gene id symbol gene type direction distance location
AMCG00009572 NA coding downstream 56021 41787613 ~ 41788999 (-)
AMCG00009567 NA coding downstream 144263 41684512 ~ 41700757 (-)
AMCG00009566 NA coding downstream 192098 41649282 ~ 41652922 (-)
AMCG00009565 NA coding downstream 235631 41606797 ~ 41609389 (-)
AMCG00009560 NA coding downstream 260559 41574140 ~ 41584461 (-)
AMCG00009573 NA coding upstream 501 41850138 ~ 41863329 (-)
AMCG00009574 NA coding upstream 17904 41867541 ~ 41874590 (-)
AMCG00009576 NA coding upstream 33789 41883426 ~ 41895243 (-)
AMCG00009583 NA coding upstream 224273 42073910 ~ 42082769 (-)
AMCG00009585 NA coding upstream 235644 42085281 ~ 42102235 (-)
G57600 NA non-coding downstream 911810 40932965 ~ 40933210 (-)
G57596 NA non-coding downstream 1067936 40721431 ~ 40777084 (-)
G57545 NA non-coding downstream 1501541 40339347 ~ 40343479 (-)
G57524 NA non-coding downstream 1685412 40159397 ~ 40159608 (-)
G57400 NA non-coding downstream 1970791 39873971 ~ 39874229 (-)
G57858 LOC103374679,LOC100699862,LOC108250355,LOC107390564,LOC106535138,LOC106904453 non-coding upstream 323621 42173258 ~ 42175707 (-)
G57873 NA non-coding upstream 355633 42205270 ~ 42205559 (-)
G57982 NA non-coding upstream 618548 42468185 ~ 42468759 (-)
G57988 NA non-coding upstream 628084 42477721 ~ 42478112 (-)
G57998 NA non-coding upstream 689802 42539439 ~ 42540113 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 18086 41814559 ~ 41826934 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 1687549 40121463 ~ 40157471 (-)
AMCG00009472 NA other downstream 3007426 38827965 ~ 38837594 (-)
G57155 dner other downstream 3262200 38580285 ~ 38582820 (-)
AMCG00009437 NA other downstream 3936052 37889502 ~ 37908968 (-)
AMCG00009582 NA other upstream 191562 42041199 ~ 42056128 (-)
G58025 NA other upstream 799213 42648850 ~ 42673707 (-)
G58333 NA other upstream 1632784 43482421 ~ 43945297 (-)
AMCG00009672 NA other upstream 2139874 43989511 ~ 43995654 (-)
AMCG00009697 NA other upstream 2652150 44501787 ~ 44512249 (-)

Expression


Co-expression Network