AMCG00009576


Basic Information

Item Value
gene id AMCG00009576
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 41883426 ~ 41895243 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009576
CCCAGCTGCGGCAGCTACACACTCGGCTGTCTTTCGCGCAAACACACGCATGCATGTACACCTAACACACATGTCACCGAGGGACGGGACCCCGCCGGGACACAATAGCCCGTCTACCGTCCCGGTGATGCTATGCAACTCTCACCAGTGCCTGAACATCCCACACGCAGCGGACACGCGTGTATACGAGCATCGCAGCTGAACCGCAGCGCTCACATAGCCCGGGCTTCCTCCCgcattgtgtttattctgtaAAGACATCCGGACGTCCTTCGTGCTTTGAAACGAAAGGGAAAAGGATGTGCACGCAGACCGCACGGCTGCTGCGGGTTTATAGCGCCCGGCTGTGCGTGGCGAGGCGTGCGCTGTAGAGACGCGGCGCACAGAGGGAGTTTCAACAGTCCCGCCTCGGTGTCCAGACACTTTCTTTCCACCGACCTGCCAGGGTGTTGACAGCGGAGACAACTCATCTTACTCGGATCGTCTTGCCGTGTTTCTCCGTTTCTCCGATATGCCGGCTATACTTGTGCATTAACCTCCGTCTCTCCAGCCGAGGCCAGAGAATGAGCAGCCgaaagttaaaatacaaatacaaatacaaagtggCATGCATGTGCGCTGCGTGTGCCGCAGCCCGCACTGGGAGTGAGTGAGCAGACTCGGCTCCGGGCTTTACCCGGCGCTCAGGTTTGCTTCTATTGCGAGAAAAGCAGTGCGTGTTTTTGTGAATGACTCAGGGTGCCTCGCCTCCGGTCTGTGCATCCCTCCCCGCGGTGCTGAAGCCCAGTTTGCTTCTTTATCATTTCTCATATTATCTGTCATTGTCCCGGAGTCTTCAGACAAGCGCAGCTGGACTGCTAGCaggagagaagaagaagaaagcacGGGGGGTTGCAAGTATGGAGGCGCTGGCCCGATCGCCAGCCTGGTTGTGTGCCGAGCTTGATTCGGGCCCTCAAGCCAGGGTCTTGGTTTTGGACTGTCGCCCTCGAGAGCACTACGAGGAGGGCCGTGTGGCCGGGGCCATCAGTGTGGCCATCCCCTCCATCCTGCTGCGGCGGCTGAAGCGGGGCCAGCTCGCCATGCCCTCCCTCATCCGCTGCCCCCAGGAGCGGCAGGGGTTCGCCAGCCGCTGCGCCACTCACGCCATCCTCCTGTACGATGAGGGCCAGGAGGCGGGCCCTGGCGGTGGCCCCTCCCCCacgcagcagcaggaggaggagtcCATCCTGGCCGTCATGCTGCACACGCTCAGGAAGGACGGCTGCCAGGCACTGTTCCCCCAACACTGTGAGAGTGGTACCAGTGTGGCCGCACGTTGGCTGGCGCCCCCCGCCTCGGTCCTGGGCCTGGGCGGCCTTCGGCTGGGCTCCTTGGGCTCCGATGGGGATTCGGACCCTGACCGGGACCCCCTGAGCGCCACGGGCCCGGAATCGGACGAACCCAGCCCCAGCGCCCAGCCCCCCTTCCCAGTGCAGATCCTGCCCAACCTGTACCTGGGCTGCGCCAAGCACTCGGCCGACCGGGACACGCTGGCCAAGCTGGGCATCCGCTACATCCTCAACGTCACCCCCAACCTGCCCAACATGTTCGAGAACAACGGTGACTTCCGCTACAAGCAGATCCCCATCTCGGACCACTGGAGCCAGAACCTCTCGCAGTTCTTCCCAGAGGCCATCCAGTTCATCGacGAGGCTCTGTCCCAGCGCTGTGGGGTGCTGGTGCACTGCCTGGCGGGGGTGAGCCGCTCAGTGACGGTGACGGTGGCCTATCTGATGCAGCGGTTGGGGCTCTCCCTGAACGACGCCTACGACTTCGTCAAACGTCGCAAGTCCAACATCTCGCCCAACTTCAACTTCATGGGCCAGCTGCTAGACTTCGAGAAGACGCTGCGCAGCCCCTGCGACCGGCCAGCTACCGAGGAGCAAGCCTTCTTCACCCCCCCGGCCAATCAGGATCCAGAGCCGCCTCCTTCCCTGTGAGGACGGTCCACTCTCTCTTTGCCCTTTCGATCTACAATGGGTTCATGGGTTGGCGACACGACGACCACCTGACCAAAATCAAGCCAATGGACGGGAATCCCCCGATCCGCACTGCTGGGGGCATCTGTATAATGCAACTGGATTGCGAGACCGTGATCGAACACAAGCACAAcgcatttttcttcttccagcCTTCGAAGGGATCCAATTGTAAACCAAACTGGCAATCGACTGTTACAGGCCACAACACGTGGATGTAATCTGAATGTATGTAATCCTGCTATCGTCTTGAgatgcagaaaaagaaaaagcttttaatatgATATAAAGAAGTCGCTTTTGTATAGCAATTTGTTGCTGGGCACATCTTGctactgtttttatatatctattttttttacgtgtttgttttttatataccTGCTTGTACGctcatttcctttctttttccgTTCGGTAGTAACCtggttcttttttgttgtttggtaGTTGCTTTTAAGTCAATACTCAACTGTCAATAAAGC

Function

GO:

id name namespace
GO:0006470 protein dephosphorylation biological_process
GO:0000188 inactivation of MAPK activity biological_process
GO:0005829 cytosol cellular_component
GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009576 True 2506 mRNA 0.58 4 41883426 41895243

Neighbor

gene id symbol gene type direction distance location
AMCG00009574 NA coding downstream 8836 41867541 ~ 41874590 (-)
AMCG00009573 NA coding downstream 20097 41850138 ~ 41863329 (-)
AMCG00009570 NA coding downstream 33789 41845020 ~ 41849637 (-)
AMCG00009572 NA coding downstream 94427 41787613 ~ 41788999 (-)
AMCG00009567 NA coding downstream 182669 41684512 ~ 41700757 (-)
AMCG00009583 NA coding upstream 178667 42073910 ~ 42082769 (-)
AMCG00009585 NA coding upstream 190038 42085281 ~ 42102235 (-)
AMCG00009584 NA coding upstream 248349 42143592 ~ 42162603 (-)
AMCG00009590 NA coding upstream 331652 42226895 ~ 42229779 (-)
AMCG00009589 NA coding upstream 348145 42243388 ~ 42254102 (-)
G57600 NA non-coding downstream 950216 40932965 ~ 40933210 (-)
G57596 NA non-coding downstream 1106342 40721431 ~ 40777084 (-)
G57545 NA non-coding downstream 1539947 40339347 ~ 40343479 (-)
G57524 NA non-coding downstream 1723818 40159397 ~ 40159608 (-)
G57400 NA non-coding downstream 2009197 39873971 ~ 39874229 (-)
G57858 LOC103374679,LOC100699862,LOC108250355,LOC107390564,LOC106535138,LOC106904453 non-coding upstream 278015 42173258 ~ 42175707 (-)
G57873 NA non-coding upstream 310027 42205270 ~ 42205559 (-)
G57982 NA non-coding upstream 572942 42468185 ~ 42468759 (-)
G57988 NA non-coding upstream 582478 42477721 ~ 42478112 (-)
G57998 NA non-coding upstream 644196 42539439 ~ 42540113 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 56492 41814559 ~ 41826934 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 1725955 40121463 ~ 40157471 (-)
AMCG00009472 NA other downstream 3045832 38827965 ~ 38837594 (-)
G57155 dner other downstream 3300606 38580285 ~ 38582820 (-)
AMCG00009437 NA other downstream 3974458 37889502 ~ 37908968 (-)
AMCG00009582 NA other upstream 145956 42041199 ~ 42056128 (-)
G58025 NA other upstream 753607 42648850 ~ 42673707 (-)
G58333 NA other upstream 1587178 43482421 ~ 43945297 (-)
AMCG00009672 NA other upstream 2094268 43989511 ~ 43995654 (-)
AMCG00009697 NA other upstream 2606544 44501787 ~ 44512249 (-)

Expression


Co-expression Network