AMCG00009581


Basic Information

Item Value
gene id AMCG00009581
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 42075478 ~ 42078291 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009581
ATGATGTCTAAAAGCAGTGAGACCATAGAGACAGCAGCTCTGGGCCGACCTTTCCAACTGGGCATGCTGTACGACTGCCGCAGGGACGCTCTGATCCCAGGCATCACTCTGTGGGACTTAAAAGACCTACAGAAGAACAAAGATGAACGCTCACAGTGCAAGACAGAGTTCAGTGTCTCTGCCTCGGACTCTATTGAGGACAAAGCTTCTGCTCTGAGGGTGAATGCTTCACTCAAGGCAAGTCTTCTTGGGGGGATGGTACAAGTTGAAGGAGCTGCCAAGTACTTCAATGACAGAATGAAATCCAACAGCCAGGCCAGGGTCACTCTACAGTACTACACCACTACTAAATATGAACAACTGACTATGGATCACTTGGCCAAAGAAAATCTAACACACAAAAAGGTGTTTGAGGAAGACACGGCAACCCATGTGGTCACTGCCGTGCTGTACGGGGCGGAGGCTTACTTTGGCTCGGCCACGCCCCTCCGCCAGCTTGTTTTCTTGGACCAGCTCCTCACTTTAGTCCCTGGTCCGCAGGCCGAGAAGGCCTCTGGgaactcctcctcctcctcatcttctGTGGGAGATCTGTCCCTCTCTGAAGAGGTGACCAGGACCGAGGAGCTGCTGGTGGAGTTACTGTCCAGCCCTCACCTCCCCGATCTCATCCACACCAGCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009581 True 684 mRNA 0.53 4 42075478 42078291

Neighbor

gene id symbol gene type direction distance location
AMCG00009578 NA coding upstream 33267 42036018 ~ 42042211 (+)
AMCG00009579 LOC107712727,LOC103384719 coding upstream 45514 41979537 ~ 42029964 (+)
AMCG00009577 NA coding upstream 114569 41951667 ~ 41960909 (+)
AMCG00009575 NA coding upstream 165360 41901833 ~ 41910118 (+)
AMCG00009569 NA coding upstream 231021 41832871 ~ 41844457 (+)
AMCG00009580 LOC103374679,LOC100699862,LOC108250355,LOC107390564,LOC104941073,LOC106535138,LOC103468062 coding downstream 92055 42170346 ~ 42175700 (+)
AMCG00009588 NA coding downstream 115003 42193294 ~ 42211548 (+)
AMCG00009587 LOC107712663 coding downstream 135313 42213604 ~ 42224519 (+)
AMCG00009586 NA coding downstream 188531 42266822 ~ 42271197 (+)
AMCG00009593 NA coding downstream 197708 42275999 ~ 42280429 (+)
G57792 NA non-coding upstream 236012 41839165 ~ 41839466 (+)
G57775 NA non-coding upstream 257683 41815921 ~ 41817795 (+)
G57770 NA non-coding upstream 325334 41749555 ~ 41750144 (+)
G57690 NA non-coding upstream 575260 41499964 ~ 41500218 (+)
G57599 NA non-coding upstream 1142268 40932967 ~ 40933210 (+)
G57843 NA non-coding downstream 6988 42085279 ~ 42088145 (+)
G57940 NA non-coding downstream 323944 42402235 ~ 42402452 (+)
G57945 NA non-coding downstream 337299 42415590 ~ 42418109 (+)
G57946 NA non-coding downstream 339850 42418141 ~ 42418505 (+)
G57947 NA non-coding downstream 340299 42418590 ~ 42420823 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 476354 41596229 ~ 41599124 (+)
G57604 NA other upstream 1080819 40990802 ~ 40994659 (+)
AMCG00009516 NA other upstream 1970426 40086474 ~ 40105052 (+)
G57430 NA other upstream 2126278 39948006 ~ 39949200 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other upstream 2638461 39434900 ~ 39437017 (+)
AMCG00009647 NA other downstream 1358699 43436990 ~ 43444420 (+)
G58324 NA other downstream 1854661 43932952 ~ 43935762 (+)
G58522 NA other downstream 2308206 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 2483486 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 2506271 44584562 ~ 44603609 (+)

Expression


Co-expression Network