AMCG00009583


Basic Information

Item Value
gene id AMCG00009583
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 42073910 ~ 42082769 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009583
TCAATACTCCATCCCGGCAAATGGCTTCGGGAATAAATGAGACCATTGAGACAGCATCACTTGGCAGACCTTTCCAGTTAGGCATGTTATACGACTGCCGAACAGAAACCCTTATTCCAGacaCCACATTGTGGAGTACCAAAACAGTAACTGAGAGCAGACAGGTTAAATCACAGATTAATACAGAGTACCAGGTCTTCGTCACAGATTCCAATAAGCACAATGTCTCTGCGCTAAAGGTGAATTCCTCACTTAAAGCAAGTCTGCTGGCAGGGCTTGTAGAAGTAGGTGGAGCTGCCAAGTACTTCAATGACAGGACGAAATCCAACAACCAGGTCAGAGTCACTCTGAAGTACTACACCACAACCAGATATGAACAACTCAACATGACCGACTTGGCAAAAAGAAAAGTGTCCAGCCCGCGTGTGTTTAAGGAAGGTACAGCGACCCATGTGGTCACTGCGGTGCTGTATGGAGCGGAGGCCTACTGTGTTTTTGGCAGAGAGGTGTCTGCAGAGGAGAACAAAAAAGACGTGGAGGGAGAACTGAAACTCGCTTTAGACGAGTTGAAGTACGATACAATCAAGACAGTTTTTTCCGTGAAAAGGAATCGAGAAGGGAAGTCTACCGTCAAGAATTTCAGCTGTATATTTTATGGGGATCTTCAGATGTCTGAAAATCCGTTCACTTTCGACGAAGCCATCAAAGTTTACAGTAAACTCCCACAACTGCTTGGAAAAGATGGAGAAAAAGCGGTGCCTGTGAAGGCCTGGCTTTACCCTCTGGCAAAGCTGAACTCAAATGCTGCGAGGCTCATAAGACAGATAAGTGATAGTTGTGTTCAGTATTTCCAGAGGGCTATAGAGAAGCTGGACGaagttgaaattaaatgtaacgaCCTGTTGAATGACCCTGTCGCAAAGACGTTACCTCTTTTCAAAGGCCATATTCAAACTCTGAAGGAAGTGACAGACCAGTACAAAGTGTTTTTCAGTAAACAAATTGCGGACATTCTGCCATCCATCCGTGGTGGTCAAAGAGAGGAGGAAGACATTAAAGATGTTTTATCACAAAATGATGGGTCTCCTTTTAACCCACAGAGGATCAATCAGTGgataaagaagaaagaaacaaacatgaacACTGTAAGAGGCTTCCTCACTACACTGCAAACCAGTGAGATCGAGATCATGTCTCCAGAGAAAATAGAACAGGAGAGATCTAACCCCAATGTTGAGATGGTGGTTTGCTTTACATTCACCTCCCTCCATCCGCCTGAGCCGTACCTGTTGGATCTGTACAGATACCTTAATGCTGAAAATAATGCCAGGTTTACATCTCAACTTCCTCCACTTTCTCCTATTCCACAGGACGCCACAGACTGCATGAACATAGGTTCCATAAAGGAGATAAAGGGGTGCTTTAAGGTGTTTCTCGATTTAGTGGAAATCCATAAGGAGAAGAAAGGAATAACATTCTGTGCTACTGACAAATCAGATAATAAATATCCAGGAGCGTGCATATTCCTCTATAAAAGTGAACGTGCTGAATGCCTTTACCATCAGCTGCCGCCAAAACCCGAAGTGATCAATCTGCAACACGATAGCATGACGGTTAAGATCTCCTTTCAAAATAGCGTGATAACTGGAGGCAAGGTGGagtataaaacacagaaaaaggaaaactggGAGTCTCTTGCTGTCACAGGCATAGAGGACACAGTGACTGTGTCAGGGCTGCAGCCAAACACGGAGTATGAGCTCAGGTCCACAGCACAGGGCAAGCTGGGCTACACTGTGAGCAGCGACATCACCGGCATAACAACACTTCCAACAAGTGCACCCAGACAACTTTCAGCTCTCCAGTCATCTCCCAATTCCATAACTATAAGATGGAAAAAACCCTCCTCTCTTGGCAAGGGGGTCAGTATAAATCATTACATCATTGAGTACAAAGTGAAAGAGAATCCTGAAAGGAGCTGGATGCAAATGATAGTGGAGAAGGAACAATGCACAATTACTTCACATCATCTAACAGagaacacactgtacaacatCCGAGTTTGTTGCAACTGCGGAGCCCTGGGGACCAGCAAGTCGAGTGAACTCACGGATGTCTGCCGGCCAGGGGCTTTAGCTGGTGTGGATGAGATCGGGGAGttaTACATTAACAGCTATCGTTCTTACACagaagatgaggaggaggaggagttcCCAGAGGCCTTCTCGGCCTGCGGACCAGGGACTAAAATTTTCTTTGGCCAAGTGATCCATATGTCATATCTGACTCCAGCCATGGACTTGCAAGAAAGTGAGACCGTAGAGACAGCAGCTCTGGGCCGACCCTTCCAACTGGGCATGCTGTACGACTGCCACAGGGACGCTCTTATCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009583 True 2393 mRNA 0.46 6 42073910 42082769

Neighbor

gene id symbol gene type direction distance location
AMCG00009576 NA coding downstream 178667 41883426 ~ 41895243 (-)
AMCG00009574 NA coding downstream 199320 41867541 ~ 41874590 (-)
AMCG00009573 NA coding downstream 210581 41850138 ~ 41863329 (-)
AMCG00009570 NA coding downstream 224273 41845020 ~ 41849637 (-)
AMCG00009572 NA coding downstream 284911 41787613 ~ 41788999 (-)
AMCG00009585 NA coding upstream 2512 42085281 ~ 42102235 (-)
AMCG00009584 NA coding upstream 60823 42143592 ~ 42162603 (-)
AMCG00009590 NA coding upstream 144126 42226895 ~ 42229779 (-)
AMCG00009589 NA coding upstream 160619 42243388 ~ 42254102 (-)
AMCG00009592 NA coding upstream 244100 42326869 ~ 42334548 (-)
G57600 NA non-coding downstream 1140700 40932965 ~ 40933210 (-)
G57596 NA non-coding downstream 1296826 40721431 ~ 40777084 (-)
G57545 NA non-coding downstream 1730431 40339347 ~ 40343479 (-)
G57524 NA non-coding downstream 1914302 40159397 ~ 40159608 (-)
G57400 NA non-coding downstream 2199681 39873971 ~ 39874229 (-)
G57858 LOC103374679,LOC100699862,LOC108250355,LOC107390564,LOC106535138,LOC106904453 non-coding upstream 90489 42173258 ~ 42175707 (-)
G57873 NA non-coding upstream 122501 42205270 ~ 42205559 (-)
G57982 NA non-coding upstream 385416 42468185 ~ 42468759 (-)
G57988 NA non-coding upstream 394952 42477721 ~ 42478112 (-)
G57998 NA non-coding upstream 456670 42539439 ~ 42540113 (-)
AMCG00009582 NA other downstream 17782 42041199 ~ 42056128 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 246976 41814559 ~ 41826934 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 1916439 40121463 ~ 40157471 (-)
AMCG00009472 NA other downstream 3236316 38827965 ~ 38837594 (-)
G57155 dner other downstream 3491090 38580285 ~ 38582820 (-)
G58025 NA other upstream 566081 42648850 ~ 42673707 (-)
G58333 NA other upstream 1399652 43482421 ~ 43945297 (-)
AMCG00009672 NA other upstream 1906742 43989511 ~ 43995654 (-)
AMCG00009697 NA other upstream 2419018 44501787 ~ 44512249 (-)
G58584 NA other upstream 2459125 44541894 ~ 44542809 (-)

Expression


Co-expression Network