AMCG00009596


Basic Information

Item Value
gene id AMCG00009596
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 42474886 ~ 42475964 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009596
GTGAACTGCTGGTCTGATATCCGCGACGCTGGTGCAAGACCACGGGTGTTGATCTCCTTTTGCCTGATCCACCAGGGCTGGTTCTCCATCTCCAAGGCGCGTTACGCCATGGGGAACAAGTGCGTTTCAGCCCTGCAGTACGGCAATGAGATGGAGCCGCTGGTTCACATCAACACCAGGGCTTCggaaggtgggggggtggaattCTGCACAGAGAGACTGGAACCCAGATCCACAGAAGCTTCTAAAGAGGACCTCAGCACAGTGGAAGAGATTGGGCCAAAGGAGGAAGgtatAAGGAGAAGAAAGACTGCTAAACCAAAGGACCCCAGGGAGGATGCTGTGCTATCCGAAGAGGTGCCAAAAGACGAGCAGACTGCTGGGCAGATTGGAGGGCCACTTCGGTCTCCGGACCCCCTGAAATGGTTTGGGATCCTGGTGCCTCAAAGCCTCAAACAAGCTCAGTCCACCTTTAAGCAAGGCAAGTCCTTGATAACTTAA

Function

GO: NA

KEGG:

id description
K23543 CCDC115; coiled-coil domain-containing protein 115

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009596 True 501 mRNA 0.54 3 42474886 42475964

Neighbor

gene id symbol gene type direction distance location
AMCG00009597 NA coding downstream 30818 42435235 ~ 42444068 (-)
AMCG00009598 NA coding downstream 44899 42429603 ~ 42429987 (-)
AMCG00009599 NA coding downstream 45300 42424928 ~ 42429586 (-)
AMCG00009592 NA coding downstream 140338 42326869 ~ 42334548 (-)
AMCG00009589 NA coding downstream 220784 42243388 ~ 42254102 (-)
AMCG00009601 NA coding upstream 34872 42510836 ~ 42517883 (-)
AMCG00009603 NA coding upstream 61264 42537228 ~ 42537555 (-)
AMCG00009602 NA coding upstream 69664 42545628 ~ 42547223 (-)
AMCG00009612 NA coding upstream 124134 42600098 ~ 42607648 (-)
AMCG00009616 NA coding upstream 214744 42690708 ~ 42703202 (-)
G57982 NA non-coding downstream 6127 42468185 ~ 42468759 (-)
G57873 NA non-coding downstream 269327 42205270 ~ 42205559 (-)
G57858 LOC103374679,LOC100699862,LOC108250355,LOC107390564,LOC106535138,LOC106904453 non-coding downstream 299179 42173258 ~ 42175707 (-)
G57600 NA non-coding downstream 1541676 40932965 ~ 40933210 (-)
G57596 NA non-coding downstream 1697802 40721431 ~ 40777084 (-)
G57988 NA non-coding upstream 1757 42477721 ~ 42478112 (-)
G57998 NA non-coding upstream 63475 42539439 ~ 42540113 (-)
G58039 NA non-coding upstream 220933 42696897 ~ 42697133 (-)
G58149 NA non-coding upstream 530637 43006601 ~ 43010113 (-)
G58246 NA non-coding upstream 911219 43387183 ~ 43387918 (-)
AMCG00009582 NA other downstream 418758 42041199 ~ 42056128 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 647952 41814559 ~ 41826934 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 2317415 40121463 ~ 40157471 (-)
AMCG00009472 NA other downstream 3637292 38827965 ~ 38837594 (-)
G57155 dner other downstream 3892066 38580285 ~ 38582820 (-)
G58025 NA other upstream 172886 42648850 ~ 42673707 (-)
G58333 NA other upstream 1006457 43482421 ~ 43945297 (-)
AMCG00009672 NA other upstream 1513547 43989511 ~ 43995654 (-)
AMCG00009697 NA other upstream 2025823 44501787 ~ 44512249 (-)
G58584 NA other upstream 2065930 44541894 ~ 44542809 (-)

Expression


Co-expression Network