AMCG00009616


Basic Information

Item Value
gene id AMCG00009616
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 42690708 ~ 42703202 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009616
ATGAGCCCACGTGCTGCAATCGGACTGTCCCGAGGCTGTGGACTGCGTCGCTGCCTGCTGGCTTCACCTGCATCTCTCTCTTCCCCGTGCATGTTATCCTTCTCCGGAAGATGCGGTGtctcctctcccttctctcaCACTGACAGCGACCGTCTCCGAGAAGCACTGTGTGTGGATGTGACGGCTATGGCCCCGCTGCGGCTCCTTCCCTGGCTCCAACTGTTCCTTTTCGCTGGACTGTCTAAGGAGGATGGGCAACTCGTCATCTCCGCTCAGGACTGCACCCTGGACTGCGTCATCAAGGGGGATCCCAAATGCGAATTCTGTCGGATCAGTCAAGAGGATATTGAGTTAACCCTGGGGATCAAGACCGACAAAATATTTGGCAGTTGTGTCCCCTGGCCCTGTCATTTTCTAATGGGCCTGGACTCCCCCTCACTGTGTCAGCACTTCGTGGGCGCCCCCCGTGACGTCACCGTGGAGTTTGTCTACAGCCAAGACCCGGGATACGACACGGTTGTTGTGTCCTGGAGGCCCAGTCAATATGGAATCTCGTTCCTCAGAGGGTTCCAGGTGTCCGTCCAGGCGCTGGGGGGCATGCTGGTGGGATGCCAGCTGCTTTTATTCCAACGCAACCTCTCCCTGGAAGCTGTTGATGCAGAGAAGGTGTACCAGTCCGACCCATTTCCAGCCCTGGCCCTGGGCTCCCAGTATGTGGCGACAGTGATGGCTTTACCAGTACCAGAGCAATGGGAAAAATACCAGCAAGAGGAAAAGTACCAGCAAAGCAAACAGTTCAGCACCCAGAATTGGTACCCCACGGATATTGCAGTGGAACAAGAGGGGGCAGATGTGATTGTGACCTTTAACCTCGCCCCCCCTAGCCTGGGGATCAATGGCTACTTTTCTTACTGTTACGGAGCCGGCACAAGAAACTACACAGAGTTCAAAGTGAACCCATCTGAGAACCAGACCCATCACAGCTTCCGTCTAGCAGGTCTCCGGGGGGGTGTGAACTATTCCTGTGGGATAGCCGCGGACCAGGTGGACCCCGTGCACAAAGGATTCACCTTCCACATGAAACCGCCCCCCCAAGAGCCGCCCCCCCCGGGCCCCAATCTGGAGTCCGTGATCCTGGTGCTGCTCCTGTTCGTCACTGTGCTGCTAGCTCTTGTCGCCGTTGGCTTCTTGTTGTTCCTCAAGAAGTGGAAagaggggaggaggaagagagcagAAATGCAGGCACCGGCACCGTGCAACTACAAAGAGGCCCCGCGTGAGGGGCCCCCCACGCAGCCCCGCCCCCCCCGGCTCCTCCTTTGCTACTCCAACAGGGACGGCCCGGCCCACATCGGGGTGGTGATGCGGCTGGCCGCCTTCCTGCAGCAGCACATGTCCACTCAGGTACACCTGGACCTGTGGGAAGGTCTGAGCCTGGTGGAGGAAGGGCCGATGGGTTGGTACACCCGACGGATGCAGGAGAGCGACTTCGTGCTGGCCGTGTGCTCACGAGGGCTCTGTCAGCTCTTGGACAAGCGGGCGCAGCACCACAGAgaaaaggaagaggaagaggaggaggagagctggGACGGAGATGTCTCAGCAGCTGCGGTGTCCTTGATCGGGGAGGAGATGGGCTGGGCTGCCTCGCGGGGGCAGGACCTCTCCAAGTACATGGCAGCGATCTTCGAGTACTCCAGAGAGACGGACTTCCCGGGCCTGCTGGGCTTGGCCTCCCGCTACGTCCTGCCCCAGGACCTGCCCCTGCTCTTCTCGCACCTCCACGGGGTGGCGCTGCATGGGCCGGGGCGGCAGCTGCTGGTGGAGAACGTCTCGGGTGAGGGGTACCTCTCGGTGCCAGCAGGGGCGGCACTTAGCCGAGCCATCACAGAGGCCAAGGGGGCGGGGGAAGACGAGGGGCGACTGGGAGGGGAAGAGGAAGCCCTGTTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009616 True 1953 mRNA 0.60 11 42690708 42703202

Neighbor

gene id symbol gene type direction distance location
AMCG00009612 NA coding downstream 83060 42600098 ~ 42607648 (-)
AMCG00009602 NA coding downstream 143485 42545628 ~ 42547223 (-)
AMCG00009603 NA coding downstream 153153 42537228 ~ 42537555 (-)
AMCG00009601 NA coding downstream 172825 42510836 ~ 42517883 (-)
AMCG00009596 NA coding downstream 214744 42474886 ~ 42475964 (-)
AMCG00009615 NA coding upstream 19425 42722627 ~ 42739824 (-)
AMCG00009622 NA coding upstream 88093 42791295 ~ 42797463 (-)
AMCG00009621 NA coding upstream 95843 42799045 ~ 42811220 (-)
AMCG00009624 NA coding upstream 109842 42813044 ~ 42836293 (-)
AMCG00009623 NA coding upstream 154601 42857803 ~ 42863632 (-)
G57998 NA non-coding downstream 150595 42539439 ~ 42540113 (-)
G57988 NA non-coding downstream 212596 42477721 ~ 42478112 (-)
G57982 NA non-coding downstream 221949 42468185 ~ 42468759 (-)
G57873 NA non-coding downstream 485149 42205270 ~ 42205559 (-)
G57858 LOC103374679,LOC100699862,LOC108250355,LOC107390564,LOC106535138,LOC106904453 non-coding downstream 515001 42173258 ~ 42175707 (-)
G58149 NA non-coding upstream 303399 43006601 ~ 43010113 (-)
G58246 NA non-coding upstream 683981 43387183 ~ 43387918 (-)
G58277 NA non-coding upstream 772631 43475833 ~ 43476088 (-)
G58336 NA non-coding upstream 828233 43531435 ~ 43568662 (-)
G58374 NA non-coding upstream 1167152 43870354 ~ 43871117 (-)
G58025 NA other downstream 17001 42648850 ~ 42673707 (-)
AMCG00009582 NA other downstream 634580 42041199 ~ 42056128 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 863774 41814559 ~ 41826934 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 2533237 40121463 ~ 40157471 (-)
AMCG00009472 NA other downstream 3853114 38827965 ~ 38837594 (-)
G58333 NA other upstream 779219 43482421 ~ 43945297 (-)
AMCG00009672 NA other upstream 1286309 43989511 ~ 43995654 (-)
AMCG00009697 NA other upstream 1798585 44501787 ~ 44512249 (-)
G58584 NA other upstream 1838692 44541894 ~ 44542809 (-)
G58589 NA other upstream 1862867 44566069 ~ 44566834 (-)

Expression


Co-expression Network