AMCG00009624


Basic Information

Item Value
gene id AMCG00009624
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 42813044 ~ 42836293 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009624
GGCGAGCTTAGCGCTTAAGCAGGATAAGTAAAACTCATTGACTGGCTGTATGtcaacacagcagcagtaaGGGGACAGTGGATTTTAACAGGAAGGGTTGGTGCATTTCTGTGTCTTttctaccccccacccccccccgcAGCAGACGGCCCCCGGTGGGAAACAAGGAGCAGGTCCACTCGATGAGGATCCGCTCTGCAACCCCAAAGGATCTCGAGGAGAACGTGGCCGGTGTGGGGATTGCTCGTCTGCTTGTTCTGCTGAGGTGCCTCTAATTTGCCAACCGGTGCCAACATGGAGCTGGAGAAGCTCTCTGGTGACGACACGGAAGGCATGATGCCCAATGGGAACCATGTGGATGAGCTGGGCCCCGAGAAGGTCACCCTGGAAGACGGGTACGATGGACCCGAAGAAGCCGAGACAGAACGGGAAGAGTTCTTGCCGCACAAAAGCGATGGGAAAGCGCAGCCACAGTTTACAGATTTCGAAGGGAAAACATCATTCGGGATGTCTGTCTTCAACCTGAGCAACGCTATCATGGGTAGTGGAATCCTGGGGCTGGCATATGCCATGTCCAACACTGGCATCATCATGTTTCTCATCTTATTGACATTTATCGCCATCCTGTCGGCGTACTCCATCCACCTGCTGCTGAAGAGTGCAGGCGTTGTAGGAATCCGTGCCTACGAGCAGCTGGGCAAGAGAGCCTTTGGGAAACCAGGGAAAGTGCTGGCAGCTGCAATTATCTGCATGCACAACATTGGAGCCATGTCCAGCTACCTCTTCATTGTCAAGTACGAGCTGCCCTTGGTCATTCAAACCTTCCTGGGCAAAACCGGGAACACGGGCAATGGGATCATTAGCAGAGCAATGGGATTAGATGACTGTGACGGGGATTATAACAGGTACTTGGGCTATACCAGCGGATTTTCCCTGACCTGCATGGTGTTCTTCCTGTTCTCGACGGTCTACACTATTCCCATCCTGGCATTTGCTTTCGTGTGTCACCCAGAGGTGCTGCCCATCTACACCGAGCTGCGCAGTAAAGTGGACCCCTTGGACACGCTGATCCTGTGTGTGCGGCTGGCTGTGCTGGTGGCCGTCACTCTCACTGTTCCTGTGGTCCTTTTCCCGGTAAGACACAAATCCGCTGCAGCTCAGCCCGACACGCCAGCTTGGTTGACTGAGTGCAATGAATGTGCCACATCTGCTCCCAGTCTCATCTTCATCCTCCCGGGAAGCTTCTACGTGCGCATCGTCCCCAACGAAAGAGAGCCGCTGAGGTCGAGACCCAAGATCCAGGCGATCTGTTTTGCAGTAGTTGGTGTCATATTCATGGTGATGAGCACCTCCTTCATCATTTCAGACTGGGTGACAGGGGAGAAAAACAGTGGGGGTGGACACTAAACCTACAGCCCCCGTCCAGGGggtaaacaacaaaaacaacaccaaaaataAGAGACAAACGTCGAACACATCAACCTCCTTCCttctatccctccctccctccctttcctcCCTCCAGCCCGAGCTTGCTGAACACAGACCCGTTACTGAATACCGTGCAGCGAGAGCAAACAAAACCAGGGCTGGGTCCCCTTGAGCTTCCTCTAGCCCCTACACCCCAAGAGAAGCAAGACTGGTTTGCTATCCCCCTTTTTTGTTCGGCTAGAGGATGCCTAAACTCCTCACCGAAGAGTCGCATTTCACTGAGGAAGGCCGTGCTTTCCGAGGCTGGCGCGAGAGAACAGAAAACCTTCTATTTCAGCGGGTCAAGAAtccacatacataataatgcTCAATTCCCGAGTATACGTCATTGCCATGCTTTGGGATTTCCAGGTTGCTGCCAATCGGGTTAAGTGTTTCCCCCAGTACTGATGACACACCGGTAGGCAGAAATAACCTTGTCCGACAACAAAACCAAGAATCCACAGCGAGTGTTTTTTCGAAAATGACATCATATACGTCCATTTAGTTTAGGAACAGCCTACACCCCCACCCACAAATCCCCTCCCACCTCCTGACATCGCAGGATCACAGATGTAACAGAATCTGACTTCTCGTCACGGAAAACCAATTAACACAGAAGCtaccatttttaattatgttttctcGGCATGACAAGTAGGCTGTCCTTCCCAACCCACCtggccaaacacacacacacacacactaacagtTCCTGTGGCTCAAAATTGCTGCAAATAAGAGTAATAAGAAACTCCAAATGTTAGAAAATGCCAACAGGGTTTCAGCGACCACTTGGGGCATGTCTCTGAATACTCAAATCCATGGCTTCCTGCAGGAAATTCAGTGGGGTGAACGGTATCCAGAGCAAACCACATTCCCCGGCTGATTTTCCAAAGTCTCCTGCTCCACAGAAAGAGGTCTTGAGCACATCCTGAAAGAAACTGTTCAAAATTCAAGTCACAGATCTTGTATTGGACCAACATGAGTCTACTTTTCCCACTTCACCCTGGGTTTGGAGAGCAAGTTCAAAAAGCAGGGAGAGCTGGGAGTATAAATCTTCACAGTAATGTTGCTCTAGAGGAAATTTCCGGCAGGATTTTCATCACAAGCAGTAAATCACAGTCAGATCCAATTCAGCCCATATCTATTTGAAATGCACCAATCACTAATGCCTCCAATCTACCAGTGCTCTCATGTACAAGGGCCGTGTTGTTCTAGAAAAGGAATCCAACGCTGTCCTTTTCTGAggatgaaaaacattttccttaataaggacaaaaataaaagataactAATATCATTATGGCACTCCGAtatttatcatgtatttattatgtggTGAATaacttataaataaatcaaacgaATGATAAAAGTAAAGAATCAGCAGAGCCCATGAGCCCGTCACAGCACATACATTTAGAGTACCtcagtggtttatttttacagtCAGTGGCCATCTATACATGCAGCCAACACAGTGAGAAAATTGTGCCATCACAGAATGCAGTATTTGATTGGTCCACATGCAGCCAATGGGAAGACTTGAGCCTTCCTATTGGCTACCATGGATAGCATTACCTTTAATCCCCTCAATCCTGTCATCCTTTTActtgggtttttattttatgtcttaaGTTGTTTTGACAGCGCAGTGTATTTCTGAAAGTATTTCTGATGTTGCTCTTGTTCCTCATGTGGCAAGATAACATTCATTGCAACCTTTAGTACACCATCCACAGATGAACTGGTCACCCTTTTCACAAACCCTTCTGCTGCCCCCCAGCCCCCAATCCCTTCCAACATCTATCAAATCACAATATATCTGTTCAGTGAATGAGCCCAAATAGTATTACCGATCTGACCCCTATGGAGAGAGACGGCTACCGATACAACCAAAGTGGATGAACCATTGGGAtcgttttattgtatttatttttttaaagggggtggggggaggggggacggGGCAGAATGTAAGTATGtcaacaaacttttttttttgtgtttaatttaattgaaattaaggTGAGGGTATGCGTGCAGGGGTTTGGTGCAAGACTATCCTCATTCTTTGGAGTCAAGGCAAAATTAAAGGGCAGGAATTGGAAAGACTTGGAGTAACATCCATGTAAAACTAACACAGCAAAACTAAAATCTTGAGAAAAGCTGTGAACGTGTATCTGTACGCTcttgtatataatgttttgaaaGCCTATTTGAGGCGGCCGTGTACTGTCCTCCAATGAAAGGCACCTTTTCAAGAACTGGGAGGTTGTTCAGATATTAATAAAGACAAATGGGAGACTGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009624 True 3785 mRNA 0.47 13 42813044 42836293

Neighbor

gene id symbol gene type direction distance location
AMCG00009621 NA coding downstream 1824 42799045 ~ 42811220 (-)
AMCG00009622 NA coding downstream 15581 42791295 ~ 42797463 (-)
AMCG00009615 NA coding downstream 73220 42722627 ~ 42739824 (-)
AMCG00009616 NA coding downstream 109842 42690708 ~ 42703202 (-)
AMCG00009612 NA coding downstream 205396 42600098 ~ 42607648 (-)
AMCG00009623 NA coding upstream 21510 42857803 ~ 42863632 (-)
AMCG00009630 NA coding upstream 91283 42927576 ~ 42931214 (-)
AMCG00009629 NA coding upstream 96824 42933117 ~ 42942679 (-)
AMCG00009637 NA coding upstream 381455 43217748 ~ 43219999 (-)
AMCG00009638 NA coding upstream 442250 43278543 ~ 43286068 (-)
G58039 NA non-coding downstream 115911 42696897 ~ 42697133 (-)
G57998 NA non-coding downstream 272931 42539439 ~ 42540113 (-)
G57988 NA non-coding downstream 334932 42477721 ~ 42478112 (-)
G57982 NA non-coding downstream 344285 42468185 ~ 42468759 (-)
G57873 NA non-coding downstream 607485 42205270 ~ 42205559 (-)
G58149 NA non-coding upstream 170308 43006601 ~ 43010113 (-)
G58246 NA non-coding upstream 550890 43387183 ~ 43387918 (-)
G58277 NA non-coding upstream 639540 43475833 ~ 43476088 (-)
G58336 NA non-coding upstream 695142 43531435 ~ 43568662 (-)
G58374 NA non-coding upstream 1034061 43870354 ~ 43871117 (-)
G58025 NA other downstream 139337 42648850 ~ 42673707 (-)
AMCG00009582 NA other downstream 756916 42041199 ~ 42056128 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 986110 41814559 ~ 41826934 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 2655573 40121463 ~ 40157471 (-)
AMCG00009472 NA other downstream 3975450 38827965 ~ 38837594 (-)
G58333 NA other upstream 646128 43482421 ~ 43945297 (-)
AMCG00009672 NA other upstream 1153218 43989511 ~ 43995654 (-)
AMCG00009697 NA other upstream 1665494 44501787 ~ 44512249 (-)
G58584 NA other upstream 1705601 44541894 ~ 44542809 (-)
G58589 NA other upstream 1729776 44566069 ~ 44566834 (-)

Expression


Co-expression Network