AMCG00009625


Basic Information

Item Value
gene id AMCG00009625
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 42887108 ~ 42888491 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009625
ATGAGGAAAGATTGTAGTAAAGCAAGTAGAAATGACTTGGATAACTTACCGGCCGATCTTCAGTCCTCACTACTGGACTTTGAGTCGGGGGTCGGTCTCTCGCACCCGTCCGCTGGACTTTTAAAACGATTATTGATCGTGCTGCGCTGTGTGGGATTCGTGTGGCTGGAGGGCGCGaatAGAAACAATGGTGACCCGTTCGCAGAAGCCCACCTTTGTAAACGCACCTTTCAGCTGATTTTATATGAAGGATCGACCGTTTGTGACAGACCCCCTTGCTTTGATGTTTTACATTCTGAGAGCTGGGGGGGGCAGGCAACAGGAAAGGACGGAGGCGTGGGCGAGGTCAGTTGGATCTGTGCATTCTCAGttgtGGGGGTTGTGTATGTTCTCTGGCTTGTGACTGTGACAGCTGTCAAGACTGATACCCGTGTCCCTGTAATAAACCCGCCTCCACTGtgcctgcgtgtgtgtgctgCTTTCAGTGCGCAGATACCTGCGTGTCCGCAGTGCCGCCAGAGGGAGACACTGCAC

Function

GO:

id name namespace
GO:0048513 animal organ development biological_process
GO:0048793 pronephros development biological_process
GO:0001822 kidney development biological_process
GO:0072001 renal system development biological_process
GO:0001655 urogenital system development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009625 True 534 mRNA 0.53 5 42887108 42888491

Neighbor

gene id symbol gene type direction distance location
AMCG00009619 NA coding upstream 389 42862696 ~ 42886719 (+)
AMCG00009620 NA coding upstream 24484 42862403 ~ 42862624 (+)
AMCG00009618 ccd22,LOC106572219,LOC104944807 coding upstream 30128 42845136 ~ 42856980 (+)
AMCG00009617 NA coding upstream 164499 42707757 ~ 42722609 (+)
AMCG00009613 NA coding upstream 198655 42675228 ~ 42688453 (+)
AMCG00009627 nt5dc2,LOC107678756,LOC107731170,LOC108442396,LOC107745746,LOC107668043 coding downstream 3207 42891698 ~ 42913492 (+)
AMCG00009628 NA coding downstream 26289 42914780 ~ 42927057 (+)
AMCG00009626 mon1b coding downstream 72476 42960967 ~ 42972378 (+)
AMCG00009631 NA coding downstream 88638 42977129 ~ 43003322 (+)
AMCG00009632 kcnd1,LOC107601760,LOC107584898 coding downstream 162782 43051273 ~ 43052391 (+)
G58008 NA non-coding upstream 250655 42629539 ~ 42636453 (+)
G57987 NA non-coding upstream 408996 42477715 ~ 42478112 (+)
G57981 NA non-coding upstream 418506 42468308 ~ 42468602 (+)
G57964 NA non-coding upstream 451956 42432877 ~ 42435152 (+)
G57948 NA non-coding upstream 459060 42427842 ~ 42428048 (+)
G58123 NA non-coding downstream 49516 42938007 ~ 42938874 (+)
G58148 NA non-coding downstream 118110 43006601 ~ 43010050 (+)
G58178 NA non-coding downstream 324219 43212710 ~ 43213028 (+)
G58195 NA non-coding downstream 360912 43249403 ~ 43249641 (+)
G58215 NA non-coding downstream 421369 43309860 ~ 43311062 (+)
G57830 NA other upstream 808867 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 1287984 41596229 ~ 41599124 (+)
G57604 NA other upstream 1892449 40990802 ~ 40994659 (+)
AMCG00009516 NA other upstream 2782056 40086474 ~ 40105052 (+)
G57430 NA other upstream 2937908 39948006 ~ 39949200 (+)
AMCG00009647 NA other downstream 548499 43436990 ~ 43444420 (+)
G58324 NA other downstream 1044461 43932952 ~ 43935762 (+)
G58522 NA other downstream 1498006 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 1673286 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 1696071 44584562 ~ 44603609 (+)

Expression


Co-expression Network