AMCG00009626 (mon1b)


Basic Information

Item Value
gene id AMCG00009626
gene name mon1b
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 42960967 ~ 42972378 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009626
CGCGGATTGGCTGTGGCCTGACGTCACTCAGCCGGCTTCCCCGACACCGGATGTGGCGGAGAAGCTGTCTTATTTATTTGGGTTTCGGCTGCTGTGGGGCTGCTGAGCTGGACGGGATTCATCGCCCCGTCTTCGTATTTTCGCCTCTTTTGGTGACATTTATAAGCGACACAACTTTTTTAGgcgtttaatttatttatgcatgtatttatttcgcAGTTAGTGCTGTCGGACTGTATATGAGTTGGTCGTGCAGCTCAGGCGAGGGCGCGTTGCTTCCCCACTAGGCCACGATGAGAGGAAAGCCGCTGCTGCGGGCCGGCGCATCTGTAAACCCGCTTAAACACGCCGTCGTCCTCGGCCAGTGACGTCGCCCCCGGTGgaccgagccgagccgagccgagccgagccgagccccTTCGTGCCCTGTGCGCTGTGACGTATCGCACCGGACGGTAAACACCGACAAACGACGAGCACACGACCGGGCATTTCTCTTCATCGagTGTCTGGGATGGTGAGATGGAGAAAgagcagcgagagagagaggagactgaCGAGGTGAAGCCCTGCGAGAcagctgctccctctctcctcaaTCACCTCCCCTCCGGGGGCAGGGACAGTGATGCGGGGGAGGACACGGCGGAGTGGGGAGGAGACGGGCTGGAGATCGGTGTCTCGGATGGGCCGGTTGAGCTGGGCTCCACACAGGGCCGGGAACAAGGACAGCAGCCCCAATCtcaaccagaaccagaactggCGTCTGAGCTGTTGCCTGATGGGGAAACTGGGGACAGCCAGACGGCAGAGgtgcaggagggggagggagccgaGTATTCCAACGTGGAAGACACCCTGAACTGCAGGGAGGAGGATCTAGTCGACCATGAAGACagagaagatgatgatgatgaagaagaggAGCAGCAGCCAGACCAGCTCTCGGACTCGGCCTCGGCCTCCACTGACAACACCCTGGAGGACTCGAGCGAGTTCCTGGGGCCGCGGCCGGTGACCGTGCTGGCCGGGGGCTCACTGGAGGAGGTGGACGGTGGGATCGGCGGGGTCCCCGGGGTGTGTTCCCCGCTCTCCGAGCCTGGCAGCCCCCCACCATCCTCCCTGACGCACCGCGACGAGGACGTGACGGCCGAGAGCTGGCGGCAGCACCGCAAGCACGTGTTCGTCCTGAGTGAGGCGGGCAAGCCCATCTACTCGCGATACGGCAACGAGGAGGCGCTCTCGTCCACTATGGGCGTCATGATGGCGCTGGTGTCGTTCGTGCAGAGCGGGGACAACGCTATCCGCTCCATCTACTCCGACGATCACAAGGTGGTGTTCATGCAGCAGGGCCcactggtgctggtgctggtgtcCCGCGGCCGCCAGTCGGAGCAGCAGCTGCGCCAGGAGCTCATGTACGTCTACTACCAGATCGTCAGCATGCTGACCCAGGCCAGCATTGCGCGCATCTTCGAGCGCAAGAAGAACTACGACCTGCGGCGGCTGCTGGCCGGCTCCGAGAAGATCCTGGACGGCCTGCTCAACCTGGTGGAGTCGGACCCCAGCTTCCTGTTGGCCGCTGTGCACTGCCTGCCCCTGCCCTCCGCCCTGCGTGACGCCCTGAGCCAGATCCTGCAGAAGGCCATCACGCCCAACCTGGTCTTCTCCATCCTCATCGCCAAGAACCAGCTGCTGACCATCGTGCAGGAGAAGACGGTGATCGAGGACACGCGGCTCGAGCCGGCCGACCTGCACCTGCTGCTCAACCTCGTCGGCGCCTCCTCTGCCTTCCAGGCCGGCGAGATCTGGACGCCCATCTGCCTGCCGCTCTTCAACCCCGACTGCTACTTCTACGCCTACATCTCGTACCTGGACCCGCCCAGCTGCACTGTctgcctgctgctgctctcCACCGACAAGGAGGCCTTCTACGCCGTGGCCGATTGCAAGCGCCGCATCGAGGAGGGCATGCGGACGCAGAACGCCCTGCCGGCCATCGCGGGCGCCCAGCCCTACAGCGTGGTGCAGGTGGGCGTCTCGGACCTGCGCCACTTCATGTACAAGCCCTTCGATGTGCCCGACAACCACCGGCAGCTCACGCAGTTCACCAGCCCCGAGATGGAGGCCCCGTACGGCACGGAGGAGGAGCGGCACCGGCTGCTCGACCTCTACCGCTACCTGCACAGCCGCTTGCACAGCGCCTCGCGCCCCCTCAAGCTCATCTACCACGTGGCGGAGAGGGAGACGCTGCTCGCCTGGgtgacCAGTAAGTTTGAGCTGTACACCTGCTTCAGCCCCCTGGTGACCAAGGCCTCGGCCATCAACGCCATCACCAAGCTGCTACGCTGGATCAAGAAGGAGGAGGACCGGCTCTTCATCCGCTACCCACCCAAATACTCCACCACCCCCAACCCCAGCAAGAGCTCGCGTGGGGGCAAAGGGGGCGCCGCCGGGCAGGAGGCCACCGGCAACGGCTTCCTGGCCCTCCCCTAGGACCCTCCCGCCTCCGAGACCACGTCGCCCGATGTCCCGCTCGCAGCCGCGCTCGCCGACTTTGTTTTCCTCGTGGTTGTTCCTCCCGAAGCGGATGTTCTTATTTTGCGAACCTGTCCTGTTAGTTGTTGTAATCGTGAGAGATGACACGGCCCCATTCGAGTGGAGTTAAACGCAAACCAATCTACGTCTTTTCTAGTGAAAGGGTTGATATTTAGCGAGCTGGTTGCAAATTAAAGCTCTGATTTAGGCTGGTGAGTCACGTGGTCTTTGAGTGTTTGATAATGGGATGTCCGTATTTtggtgctttgtgtttttttttttctctccattgtCCTGGCTGACCATTGTAGGGGACAATGTGACAATGAAGGGTGCATGTGTACCAGAACTGGAATTGCTGACCCTAATAGTGACCTGGGGTTTAATGTCTTTGATTCTGGGTCAGCTAATCCGCTAGAGGAACCGGTCTCCCCTGTGCGACTCGACTAACCAACGGGATCGGACATCTTTTTAATGCAGAATTGCTTTTAGATTCTCCACAGAGGtcgtgtgtgcgagtgtgtgtgtttgaactgTTACATAGTTTCCAACCGGAGGACACGGCTGAACCTGAATTCTTGCCCGAACTTGAAACTTTTCAGTTTCTCTACAAATTCAGCGATTTTTCCACTGAGGAGGACGTCGTTATGATTATTTTGAAGACAATCTTGGGGACTTGACCTTTTTAAGCAGATCTGACGTTTGCCTGTGGAGCTCCATTGTTGAAATAAATTGCACATGTTACCAAACGCACCCTCCCCACCTTGCGTTGTGTTCTGTCACCATGAGAATCGGGAGCTTTCTCGGCCGGCGGTGCTTTTTGGTGCCCGTGCTTCAGTGGGGCCCCGAACAGCTCGCTCTGTGGGCCTGATGGGCTGATTGAATGTATTAAGCATTGGGCTCCGCACTGGGTGACAAACAGGTTTCCCTCTTGGAGCTGGGGGGTGCCACACAATGGTAggagcagaaaaataaataagacggTCACCAGTATTAGAAAAGCTCTACCTTTAGAAGTGTATGAATGGTCGCACAATTTTGTTGATTGTTTATATTGAATAACTGTTACATAGCTCTGTTGCAGGCTGGGTGTGTGAAtagttttaaattcagaatgTTGGTAGTGTGGGGTTTCCCAACATTCTCTTTGTTAATGGGGCTCAGGTACAAGGAAGGACAAGTCTATGGGTGTTGAACTGGTCCTGCTGCTGCGTGTGAGCGAGTTCCAGTCCAACAAAGCATCGATGCATTGCTAGGGACGCTTCTGTGGTacaaaaagacctagaagatcaTCGCAGTGTGGGTGGGGATGTTCTCGGACTGTGTTTTCATATCGCTGTTTGAATTCAAGACCTGGTCTTGTATCGTGCACGTGGAATTGAAGTGTCACCCTTGTGTGCTACGGTGTTACTCCTTTACGACGATGGAGGGTGGGAATGGATGGAGGAAAAGTTGCTTTCGTTGCATGGACAATATGGCCCCCAGGCCAGGCCAGGCCTTGAGAATGGTGTGATATTGTGAGTCGGTGTGTAATTGGCGGTTCTTGAATATGTTgggtgttttaaatgtgtgtggtgCAGTCAGTGACATTTTTGTAGAGGAATGATTTATCTGACTAATGAATGATGGATAATGACGATAATAaccatgatttaaaatatggacCATCACGTGGGTCTGAAACCAATGTGATAGTGCGGAGCTTCGAGAATGTACCTGCTGTCTTGGCTTCTTCTCAATTAACTTGTAAACCGAGAGGCAGTAAATTTGGATATATTTTTGCTTGTCCGATCTGGGTTCACTGTCAGGACTGGGGTAAAGATAAACTCCCCAGAGTTTAATGTCAAGGCCAGTGCATCTGCTCTTACTTTAGCCGTCTCCGTGCTTTGggtgattttcttttccttccacACAGCCTTACTTGTTCCCCAGTGGCTGGGGTTTAAGGCTGACTTAACAAAACTGGAAGTCAATGTTTTGTATCTGCACTTTGAACTCAAACGTTCTGGGCTCTgggaatttaaaaatgtttttgtttactgaCAAAGGGGGTTATGAAAGTACGACTGTggattttgacttttttttttttattaaaagatgaaaagttac

Function

symbol description
mon1b Involved in early viral transcription and late viral transcription. Located in cytoplasm. Part of Mon1-Ccz1 complex.

NR:

description
PREDICTED: vacuolar fusion protein MON1 homolog B isoform X1

GO: NA

KEGG:

id description
K20195 MON1; vacuolar fusion protein MON1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009626 True 4650 mRNA 0.55 5 42960967 42972378

Neighbor

gene id symbol gene type direction distance location
AMCG00009628 NA coding upstream 33910 42914780 ~ 42927057 (+)
AMCG00009627 nt5dc2,LOC107678756,LOC107731170,LOC108442396,LOC107745746,LOC107668043 coding upstream 47475 42891698 ~ 42913492 (+)
AMCG00009625 NA coding upstream 72476 42887108 ~ 42888491 (+)
AMCG00009619 NA coding upstream 74248 42862696 ~ 42886719 (+)
AMCG00009620 NA coding upstream 98343 42862403 ~ 42862624 (+)
AMCG00009631 NA coding downstream 4751 42977129 ~ 43003322 (+)
AMCG00009632 kcnd1,LOC107601760,LOC107584898 coding downstream 78895 43051273 ~ 43052391 (+)
AMCG00009633 kcnd1,LOC107584898,LOC107601760,LOC106572071 coding downstream 133101 43105479 ~ 43112950 (+)
AMCG00009636 NA coding downstream 217227 43189605 ~ 43213919 (+)
AMCG00009639 NA coding downstream 279824 43252202 ~ 43253062 (+)
G58123 NA non-coding upstream 22093 42938007 ~ 42938874 (+)
G58008 NA non-coding upstream 324514 42629539 ~ 42636453 (+)
G57987 NA non-coding upstream 482855 42477715 ~ 42478112 (+)
G57981 NA non-coding upstream 492365 42468308 ~ 42468602 (+)
G57964 NA non-coding upstream 525815 42432877 ~ 42435152 (+)
G58148 NA non-coding downstream 34223 43006601 ~ 43010050 (+)
G58178 NA non-coding downstream 240332 43212710 ~ 43213028 (+)
G58195 NA non-coding downstream 277025 43249403 ~ 43249641 (+)
G58215 NA non-coding downstream 337482 43309860 ~ 43311062 (+)
G58214 dedd,LOC108411641,LOC107758014,LOC107699191,LOC107603111 non-coding downstream 346538 43318916 ~ 43324579 (+)
G57830 NA other upstream 882726 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 1361843 41596229 ~ 41599124 (+)
G57604 NA other upstream 1966308 40990802 ~ 40994659 (+)
AMCG00009516 NA other upstream 2855915 40086474 ~ 40105052 (+)
G57430 NA other upstream 3011767 39948006 ~ 39949200 (+)
AMCG00009647 NA other downstream 464612 43436990 ~ 43444420 (+)
G58324 NA other downstream 960574 43932952 ~ 43935762 (+)
G58522 NA other downstream 1414119 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 1589399 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 1612184 44584562 ~ 44603609 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000306_03248839_03256675 MON1BB, MON1B coding CI01000306 null 3248839 ~ 3257063 (+)