AMCG00009629


Basic Information

Item Value
gene id AMCG00009629
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 42933117 ~ 42942679 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009629
CCATGCAGCACAGGGAGGGGACACCAGCCCCATTTTGGTCCACTGCAGCGCGGGCTGCGGCAGGACGGGGGTGATCTGTACAGTGGACTACATCCACGATCTTCTGCACACGAAGCGGATCAACGACTCCTTCAGCATCAAGGACATCGTGATGGAGATTCGGAGACAGAGACCTTCTGCCGTGCAGACCAAGgagCAGTATGAGTTCGTCTACCACACGGTGGCCCAGATGTTCCAGAAGGCCCTGGACTCCGACAGGCACAACTACGAGAACCTGTCCGAGACCTGCGCCCAGGTCTACGACGATGTGGGCACAGTGAGCCGACCGGCACCAGACCACTGCCCAGCTCATCCCAGCAAGCCTCCCGCCAAGAGCAAACCAGCATTAAAGCCCCGGACTTCTCTGCCCCCCAAGGAACAGAAGATGAATGACACCTACGCCGTGGTGAACAAGCTCAAGAACCGGCTCCCACCGGCAACGGCCCCCGCTTCCACGGTGCACCACTACGACAACGCGGACCAGGGCTCCCCCCGACCCTCGGGCACTGCGCTGTACACGGCTGTCAAGCCCAAGCCCCGGTTCGGGAACTCCCCCACCGCCCCGCCCAAGCCCATCTATGCCACGGCTGCCCCGTCCAATCAGACGAGAGCGAACGGCAGTTTCGGGCGGTCCTCTGTCTTGGAGCCAGTTAGCTATGACATCGGTGGCCCTGCCGACAGCAGCACCAGCAATCACACGactCGTGACTCCATCGCAATGAAAATGAACCTGGAAAGCCAGCCGTCCACAGACGATGATTATGAGTATGTGTCCAATCCACTCCAAGGGACCTTGAACTACTGCACAGCCAACAGCCTGGGTTTCAACTGCCGGGTCAAGAAACCCAAAGGCCCGCGGGACCCCCCAGCCGACTGGAGCCGAGCCGAGCGGTAGGACCACCGGTGACGCGGTTTTGGAGGCGGCAGAACTCCGGGAGTTTCAGTGGTTGCTGGAGGTCTTCAATTCCCCCGCCCTTGATTTAAACTGTCAGATACCTAACAGTCCAGCCAACGCACATTCATTGCATCTCAAACCGCCTGACCAAGGCACAGCATGGCTCTTTGACTGGCGCCGAGGCCTGCCACACGCTACACGTGGGACACGACAAACAAGGAGAGGAGAAAAGGCTGTTTTCTCATTTATGGTCTGCAGTGCGCACACACACCGTCGCtggagacggacagacagacccACTTAGAAGTCTGTCCTCCTGTTGTGTAGATATTTCTCAACATGTCAGAGACAGCAAGCATCAGCCAGTACATGCCTGAACTATGAATCTCCCGGCCTCCATCAAAGACCGTGACATTGGGGCAGCTGAAACAAGACTTTCGACGAGTGGGCGGCCTGACTGAGAAGTGACGCCATCACCAGTGTCTTATTTAATTCGGATTGGCCTGCCTGAAACATTGTGGCACCACAGATTGAGACAGAGGATGTCCAGACCTACACTTTACTCCAAAGCAAGTCACAGCCTGACATTTTAAGCGGACCGGGaggattttttgtttctctgaagTCTTACGGCAGGGAATGAGAGAGAAGtattgtgtgtggggggggattgTGAACCGTCTCATTTGGGTCACCAGTAAATCAGTCAAAGctaaatgtgtcttttttttgtcGGTGAGGGTTCTTTTCCGAGGCTGTGGGAAGCAAAGTATATCAATTCAACACCCATCTACAAACCACTGTACTCCCTGCAGTTTATACAATGCCTTTCATGGGGCCTGGTCTAATTTAAATGATCACTGTTCATATGAATACTGCCGTTTTTATTATCTGGGCTTGGGCTGGTGTGGTTTCTCTCATTTTGGTGATGGCTTGTGTAAATAATACCTGGTGTGATTTTaacttatttgaaatgtaaaatatggtgttaataaaaacaaattgttgaGTCATTAAGTCACTTCACATTTTTAACACAGTATGTATTATTCACatcattaactgaaatataTCTATAACTTCTAATGCAAATCTGGTTCTTGATGTGACAATTTAGGGAgtttttttgtaacattataTAAGTGGAAACAGTAAAATCAATATCGTCTGCCTTATACCCTCTTGTATTCAATATGTTGCAAACGATGCGTATTTCAGAGCCATCGATAGTAAAACAAGCAACTTGGATAGGACGGGAAGAAAATGAACACGAACACTAATAATGTCAACCTACtactattttaagatatttcatttgcatttatttacactAGGTTGATTTGTATACTACTGTATT

Function

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009629 True 2291 mRNA 0.50 10 42933117 42942679

Neighbor

gene id symbol gene type direction distance location
AMCG00009630 NA coding downstream 1903 42927576 ~ 42931214 (-)
AMCG00009623 NA coding downstream 69485 42857803 ~ 42863632 (-)
AMCG00009624 NA coding downstream 96824 42813044 ~ 42836293 (-)
AMCG00009621 NA coding downstream 121897 42799045 ~ 42811220 (-)
AMCG00009622 NA coding downstream 135654 42791295 ~ 42797463 (-)
AMCG00009637 NA coding upstream 275069 43217748 ~ 43219999 (-)
AMCG00009638 NA coding upstream 335864 43278543 ~ 43286068 (-)
AMCG00009645 NA coding upstream 354380 43297059 ~ 43300524 (-)
AMCG00009641 dedd,LOC106572035,LOC107665071,LOC107599036,LOC107603111,LOC107755304 coding upstream 376156 43318835 ~ 43331478 (-)
AMCG00009643 NA coding upstream 389752 43332431 ~ 43338522 (-)
G58039 NA non-coding downstream 235984 42696897 ~ 42697133 (-)
G57998 NA non-coding downstream 393004 42539439 ~ 42540113 (-)
G57988 NA non-coding downstream 455005 42477721 ~ 42478112 (-)
G57982 NA non-coding downstream 464358 42468185 ~ 42468759 (-)
G57873 NA non-coding downstream 727558 42205270 ~ 42205559 (-)
G58149 NA non-coding upstream 63922 43006601 ~ 43010113 (-)
G58246 NA non-coding upstream 444504 43387183 ~ 43387918 (-)
G58277 NA non-coding upstream 533154 43475833 ~ 43476088 (-)
G58336 NA non-coding upstream 588756 43531435 ~ 43568662 (-)
G58374 NA non-coding upstream 927675 43870354 ~ 43871117 (-)
G58025 NA other downstream 259410 42648850 ~ 42673707 (-)
AMCG00009582 NA other downstream 876989 42041199 ~ 42056128 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 1106183 41814559 ~ 41826934 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 2775646 40121463 ~ 40157471 (-)
AMCG00009472 NA other downstream 4095523 38827965 ~ 38837594 (-)
G58333 NA other upstream 539742 43482421 ~ 43945297 (-)
AMCG00009672 NA other upstream 1046832 43989511 ~ 43995654 (-)
AMCG00009697 NA other upstream 1559108 44501787 ~ 44512249 (-)
G58584 NA other upstream 1599215 44541894 ~ 44542809 (-)
G58589 NA other upstream 1623390 44566069 ~ 44566834 (-)

Expression


Co-expression Network