AMCG00009640


Basic Information

Item Value
gene id AMCG00009640
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 43315628 ~ 43318501 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009640
TGTACACTGAGGCCAGAGACTTGTATGCAAAACAGATATCCGTTTGTCTTTACGTGTATGTAAGTGCTGTGCAATTACGGAGAACTTGCAAGTATTTGGGTGGTCAAAAAATGGGAAAATTGTACTTTTGATCCGTTCCAATTTGCAGAAGAAATTACTATATAAATCTATAGTGTTGTTTGTATAAGTTTATTTATGGTCAATAATTATTCTATTAAAAGTTTCCACCCTGCTCTCCAACAAACACTGACCATCATTTCTTAAACAttaagaaacataataatagataatcatcattataattaatgtagGTAATAAAGGCTGTTTCAATTTTATTCCACATTATGATGatggtaattaaaaataataattatttatttttgaggaaAACTTCTACGTTTGTGCATCAAATACGCTTGCGTCATAGAAAGCTGCTACAGGCCGGGATGCAATGCTGTGACACAAAAGCCGGGTTGCTAGGGCAGCGCTGTAAACAGCAGCGGACAGAAAGAAACATGGCGTCGAGCTTCACTGCTAACCAGtaTGAAAATGCCTTCAAGTCCAACAGGCTTCAGAACTGGACCGTGCCCAAACAGTACAAAGAGAGACCCTCTGCTCTGGATGGACACACGCAGTTCATCGCCAATGACCGGGGCCACCTGCTGCCAGGGCTGAAAGTCAAAGCCAAGAGTGGCAGCGCAGGGGGCTCTTTCGTGGGTACGTGGGAAATGCCTCTCCGCATCCCGCCCGCTCACGTCAGTTACACCGGCAGGTCAGTAGAGGGCGCCGCAAAGCTGAAAACCTGGATAGAAGGAGCCGCTTCTGGGCGCAGCAGCGGAGACAAAAGTGCGGCGGGGACTGCAGGCCAGCAAACTCCTGTAAACCCACCAGAAACGCAGCATCCAGAGACCTCACCTCGACCCCAGAGTCATACAGAAGCACCTGCCTCCGCTAGACCGGCTACCCAGGAGATGACCGGCTCTCCCCAGCAGCTACAATCACCCGAGCCCCCGGCCGCAGAACAGCCCTCCACTGAGGTCAACTAACTGAAtgagagatgaaaaaaaagcgataaattgaataaaattcTCAAATTATAGAGCATATTTGTTGCTGTACTTGCCTTGCTGGATCTGAATCGATATACTGGGAGCACAAAGGTCTTAAGAAAaacctttatccaaggcaacttacagGTTGACAAGAGAACAATATAAAtcgataaacaaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009640 True 1232 mRNA 0.45 5 43315628 43318501

Neighbor

gene id symbol gene type direction distance location
AMCG00009635 fam50a coding upstream 42256 43267927 ~ 43273372 (+)
AMCG00009634 NA coding upstream 48729 43258520 ~ 43266899 (+)
AMCG00009639 NA coding upstream 62566 43252202 ~ 43253062 (+)
AMCG00009636 NA coding upstream 101709 43189605 ~ 43213919 (+)
AMCG00009633 kcnd1,LOC107584898,LOC107601760,LOC106572071 coding upstream 202678 43105479 ~ 43112950 (+)
AMCG00009646 NA coding downstream 98330 43416831 ~ 43424850 (+)
AMCG00009656 NA coding downstream 353268 43671769 ~ 43720150 (+)
AMCG00009654 NA coding downstream 418096 43736597 ~ 43740863 (+)
AMCG00009653 NA coding downstream 424953 43743454 ~ 43748128 (+)
AMCG00009655 tbc1d25,LOC104943506 coding downstream 432982 43751483 ~ 43756359 (+)
G58215 NA non-coding upstream 4566 43309860 ~ 43311062 (+)
G58195 NA non-coding upstream 65987 43249403 ~ 43249641 (+)
G58178 NA non-coding upstream 102600 43212710 ~ 43213028 (+)
G58148 NA non-coding upstream 305578 43006601 ~ 43010050 (+)
G58123 NA non-coding upstream 376754 42938007 ~ 42938874 (+)
G58214 dedd,LOC108411641,LOC107758014,LOC107699191,LOC107603111 non-coding downstream 415 43318916 ~ 43324579 (+)
G58291 NA non-coding downstream 359850 43678351 ~ 43680953 (+)
G58304 NA non-coding downstream 555280 43873781 ~ 43875723 (+)
G58317 NA non-coding downstream 591087 43909588 ~ 43915760 (+)
G58319 NA non-coding downstream 602973 43921474 ~ 43926631 (+)
G57830 NA other upstream 1237387 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 1716504 41596229 ~ 41599124 (+)
G57604 NA other upstream 2320969 40990802 ~ 40994659 (+)
AMCG00009516 NA other upstream 3210576 40086474 ~ 40105052 (+)
G57430 NA other upstream 3366428 39948006 ~ 39949200 (+)
AMCG00009647 NA other downstream 118489 43436990 ~ 43444420 (+)
G58324 NA other downstream 614451 43932952 ~ 43935762 (+)
G58522 NA other downstream 1067996 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 1243276 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 1266061 44584562 ~ 44603609 (+)

Expression


Co-expression Network