AMCG00009642


Basic Information

Item Value
gene id AMCG00009642
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 43345226 ~ 43373271 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009642
ATGGACTCTGAAACACACCCAGAGATCTTGTTCCCAAAGGCCAACATCAATTTCAGTCAGTCGACGAGTGGAAAGAACAGTGAGGCGACTGTGATCGAGCCCAGAAAAAAGTACTGCGTGGGAGAGACTCTGAGCGTCTTGGTGCAGATGAGGGACCACCATTATTACCTCAAGACCTACGGAGGCGATTTCATCACAGCCCGGATCTATTCTTCCAATCTGAAGGCGGCGGTTTCAGGGGTTGTCGAAGACTTCCAGAATGGTACCTACCGCATCAATTTCAAGTTGTTCTGGCCAGGGAAAGTGACGATCCATTTGCTGCTGATCCATTCCAGCGAGGCTATCTCGGCCCTATGGAGAACAAGGCAGCAGGACTATGATAAAATTATTTACACGGGGGTCTTCTTCAATGGCACAAAGAAAGAGACATCACCCTGCCGGTTCATGAAGAGCCCAAATACAACTGTGTGTTCTTACGGGGATGAGCGGGACGGTGAGCGTTTTTACTGTCTCAAGACGCACTCCCTGCCTTGCGAGGCTCTGCATACAATGGTCACGGGCTACAATAAAACCAATCTTTTCAGTACAGAGGAGAACAAGATGCTGCAAAGGACAAATATTGGGGTTCAAATCCCAGTTGATATTCAAGATATCACAATTGTCACCTGTGATGACACTTTCCCAGAAACTCTAGAGAAATGCCAGTTTGGGATGAGCTCTCCAATTCCCAGTGGCTACTTTTTCCAAAACAAGTGGTTCTCCTCCTACTGCCACACTGAGGACTTCCTCAGTCCGGACTCCATCACTGGCTGCCTGCGGGGGAAAAGTCTGCATATCAGGGGCGACTCCACTTCACGCCAATGGATTGAGTATTTAGTGGCAAAAATTAAAGATCTGAATTACACCATTCCAGTCCATGGCAACGCTCCGAGGCTGGCCATCTCGAGCAATCATAACTTCAGTGTGCAGTGGAAAAAACACGCTCATCCATGGATAACTTATGAACCGCAGCCTTTACATTATGCATCATACATAGCTAGAGACCTTGACAGTGTGGTAGGGGGAGAGAACACTGTGATTATGATCTCTGTGGGGCAACATCTGCGGGCCTTCCCTATACAGATCTTCATCAATCGCATCATCAGTATCCGACGGGGAATCGAAAGACTGCTGCAACGGAGCCCGCTGACCAAAGTCTTCATCAAATATGAGAACACACGGCATTTTTGGGAATACATTACCGTTCACAATAACTGGCATGGGCATCTAAATAACTTGGCACAAAGAGAGGTGTTTAAAGGGCTGAAAGTGGGATTTGTGGATGCCTGGGACATGACAGTAGCTTCCAATGAGTTTGCAGTCCACCCTGCAGAAATGGTTATCAGCAACCAAGTGGCCGTCTTCCTCTCCTACCTCTGCCCCTCACATCCAGTGTCCCCTATACCTTTCCAGTGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009642 True 1458 mRNA 0.48 5 43345226 43373271

Neighbor

gene id symbol gene type direction distance location
AMCG00009644 NA coding downstream 3561 43338664 ~ 43341665 (-)
AMCG00009643 NA coding downstream 6704 43332431 ~ 43338522 (-)
AMCG00009641 dedd,LOC106572035,LOC107665071,LOC107599036,LOC107603111,LOC107755304 coding downstream 13748 43318835 ~ 43331478 (-)
AMCG00009645 NA coding downstream 44702 43297059 ~ 43300524 (-)
AMCG00009638 NA coding downstream 59158 43278543 ~ 43286068 (-)
AMCG00009648 wdr13,LOC107584863,LOC107552201 coding upstream 50634 43423905 ~ 43431555 (-)
AMCG00009649 NA coding upstream 61141 43434412 ~ 43439221 (-)
AMCG00009651 porcn,LOC106567241 coding upstream 71302 43444573 ~ 43455887 (-)
AMCG00009650 NA coding upstream 139174 43512445 ~ 43522137 (-)
AMCG00009652 NA coding upstream 232402 43605673 ~ 43644666 (-)
G58149 NA non-coding downstream 335113 43006601 ~ 43010113 (-)
G58039 NA non-coding downstream 648093 42696897 ~ 42697133 (-)
G57998 NA non-coding downstream 805113 42539439 ~ 42540113 (-)
G57988 NA non-coding downstream 867114 42477721 ~ 42478112 (-)
G57982 NA non-coding downstream 876467 42468185 ~ 42468759 (-)
G58246 NA non-coding upstream 13912 43387183 ~ 43387918 (-)
G58277 NA non-coding upstream 102562 43475833 ~ 43476088 (-)
G58336 NA non-coding upstream 158164 43531435 ~ 43568662 (-)
G58374 NA non-coding upstream 497083 43870354 ~ 43871117 (-)
G58377 NA non-coding upstream 500510 43873781 ~ 43875739 (-)
G58025 NA other downstream 671519 42648850 ~ 42673707 (-)
AMCG00009582 NA other downstream 1289098 42041199 ~ 42056128 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 1518292 41814559 ~ 41826934 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 3187755 40121463 ~ 40157471 (-)
AMCG00009472 NA other downstream 4507632 38827965 ~ 38837594 (-)
G58333 NA other upstream 109150 43482421 ~ 43945297 (-)
AMCG00009672 NA other upstream 616240 43989511 ~ 43995654 (-)
AMCG00009697 NA other upstream 1128516 44501787 ~ 44512249 (-)
G58584 NA other upstream 1168623 44541894 ~ 44542809 (-)
G58589 NA other upstream 1192798 44566069 ~ 44566834 (-)

Expression


Co-expression Network