AMCG00009646


Basic Information

Item Value
gene id AMCG00009646
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 43416831 ~ 43424850 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009646
ATGGTAAAGATGGGACTGGACATCCTTCTGCTTGCCGaCAACCAAGGCACCACAGAATACATCCTGTATACAAACTCGTTAAAGTGGAAAGACGCCGAAACATACTGCAAAAGTAGACATTCAGAACTGGTCACGATAAAGAGCCAGGCGGAGAACCAGGTAGTGAAACAGAAAGCAAACGGGAAGAAAATCTGGATCGGACTCTTCAACGATCCCTGGCTGTGGGCAGACGGAGCCAATTCTACGTATCGGCAGTGGGGCGGCAGTGACCCGGACAACGCGAATGGGGCTCAAGGCTGCGCGGGGGATATACTGCCCCCGGTCCCATTTGCAGACATGAGAAATGTCACATTGGTGCAGGAGAACAAGACCTGGGATGAAGCTTTGCAGCACTGTAGATCTGAATACACAGACCTCACCAGCATCGTCTCCAAGAAGGAGGCCAGGCTCACTGCCTTGGTAGCGGAAAATGCCCAGTCGTCCCACGTGTGGCTGGGCCTGAGGCAGAGCATTCTGGACCCCAACCTGGAATGACTTGAAACGGGTTCATATCAACCAATACGCAACAATGACAACTAGTTCACTACACCACTGGAAATGGATGAAAACCCTTCAGCTTGTATCACAGCGCAGCTTGGAATTTACTGACCCTAATTATAATAAATCCCACAATTCAAGTGAACATGGaggcattttgtgttttttatttgatcatatAATTTGTTAGCTGATGGTTCTGTTATATAGGCCTACACTTTTGGGGGCATCGCACCAAAAGACATTCAGTTGACATTCATAAAGagatcacattttaaacaataaaaaatacattcttaccTTATTCTTATTTGATGTGATCCTGCCATATGTTCTGGACTTCTATACCAGCATGGGCATGCAAATaaaagcatgttgtttttttgttttgttttttattctcattttctttattattatta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009646 True 959 mRNA 0.45 6 43416831 43424850

Neighbor

gene id symbol gene type direction distance location
AMCG00009640 NA coding upstream 98330 43315628 ~ 43318501 (+)
AMCG00009635 fam50a coding upstream 143459 43267927 ~ 43273372 (+)
AMCG00009634 NA coding upstream 149932 43258520 ~ 43266899 (+)
AMCG00009639 NA coding upstream 163769 43252202 ~ 43253062 (+)
AMCG00009636 NA coding upstream 202912 43189605 ~ 43213919 (+)
AMCG00009656 NA coding downstream 246919 43671769 ~ 43720150 (+)
AMCG00009654 NA coding downstream 311747 43736597 ~ 43740863 (+)
AMCG00009653 NA coding downstream 318604 43743454 ~ 43748128 (+)
AMCG00009655 tbc1d25,LOC104943506 coding downstream 326633 43751483 ~ 43756359 (+)
AMCG00009658 camkvl,LOC101077320,LOC105006803 coding downstream 410033 43834883 ~ 43852529 (+)
G58214 dedd,LOC108411641,LOC107758014,LOC107699191,LOC107603111 non-coding upstream 92252 43318916 ~ 43324579 (+)
G58215 NA non-coding upstream 105769 43309860 ~ 43311062 (+)
G58195 NA non-coding upstream 167190 43249403 ~ 43249641 (+)
G58178 NA non-coding upstream 203803 43212710 ~ 43213028 (+)
G58148 NA non-coding upstream 406781 43006601 ~ 43010050 (+)
G58291 NA non-coding downstream 253501 43678351 ~ 43680953 (+)
G58304 NA non-coding downstream 448931 43873781 ~ 43875723 (+)
G58317 NA non-coding downstream 484738 43909588 ~ 43915760 (+)
G58319 NA non-coding downstream 496624 43921474 ~ 43926631 (+)
G58467 NA non-coding downstream 744635 44169485 ~ 44169789 (+)
G57830 NA other upstream 1338590 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 1817707 41596229 ~ 41599124 (+)
G57604 NA other upstream 2422172 40990802 ~ 40994659 (+)
AMCG00009516 NA other upstream 3311779 40086474 ~ 40105052 (+)
G57430 NA other upstream 3467631 39948006 ~ 39949200 (+)
AMCG00009647 NA other downstream 12140 43436990 ~ 43444420 (+)
G58324 NA other downstream 508102 43932952 ~ 43935762 (+)
G58522 NA other downstream 961647 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 1136927 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 1159712 44584562 ~ 44603609 (+)

Expression


Co-expression Network