AMCG00009649


Basic Information

Item Value
gene id AMCG00009649
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 43434412 ~ 43439221 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009649
CCTGGAGATCCGGTGAATCATTAATCTCACTACCGAATGAGGAGTCGTTCAGACAAGCAAAGAAGGAACTGATCGAACATTGCACGGCCCCAGATCACTTACGGACAGATCTGTCTCCAAGGTTGTCTTACAACCCTAACATCCAGGAAAAACGTCTCAATCCAGTTCAACAGAGGGACAGCGTGCCCTCTCTCTGGAGTTTCCCTGGCATCGATCTAGTCCTGTGACAGACCTACAAGAGAGCCGGGGAGATGACGCGGAATGACAACTGCAACATGACGGGAGCAGAGATCCTCTTGTCTGCCGAGTTCTTCAAAGTGATTAGGAAGGAGCTGTGGTTGTTCCTGCTGCCCGGTGCAATGGCCCTCATCCTGCTGGCCTTGTTCCTGGAGGAGATGGGCTTCTTCCTGCGAAACGTGGTGTCCTCCAGACGCAGGCACCTCTATCTCTGGATCATGGGCATGTACCCGGTGTGGGGGATGATGTCCATCATCGCTCTCTATGTTCCTCGTTCCTCATCGCTTTGCAATTTCTTTGCTTCCCTGTCGAATTTGGCCTGGATGAGTGCGGCTGTTCTTCAGCTCTCTGTAGTGCGGACCATCCTCTTCTTCATCACACTGGTTCTGTGGTCCGATGAGCAGTATGACTACGGAGATGTCGACTATGTAAATCCCAACTCCTACATCAATGTTATCATCGGAGTGTCTACCTTCCTCTCCTTCTACGGCTACCTTCTATTCTACAAGGCTACCAAGAAAGCATTGCCTGGCTATGGACTACGCGTGAAGTTCATCTGCATCATCGTGGTCCTGTTCCTCTTGATCTACCACTACACGGTCATTGTGGAAATGTTCTGCATCGGTGTCTTCGCACGCCACGCATTCCGCAAGGTGGAGCCCTGCCCTGAAGTAAGCGTGTCTTCGGGGGCATCACCAGTGGGGCGGCAGAAGGAGAAGGCGGTGCAGACAGAGGATGTGTGGCCTCTGGGGGGCCGGTTCTCTGTGACGAAAGAAGATGCCTGGCCAGGCGGCGGGGGGGCCGGGGGCGCCTGGAACCACGGCTACAACAGCGACAGTGAGGACAGTTTGTGCAGGATTGAGCACGCCCCCTTGGATCGCTTCCCCTTCCCCCTCCACACCCCCGCACGGACCCTACAAGCACCTCCAGCCCCAGCCAGCCCCACTAACCCAGAGGAAACCAGGAATCCCAAGCATTCAATGGAGAATCACTCAGTGGAGCTAAACACCATGACTGTCATAGCAGAAATCAACTGCAACAGAACCAGCGAGGCTACTGTCGTGTAGTCAGGATCATCCACGTGCTTGCTCTACAGTCACCCTTGAACTCTTTCACACAGAATGGTTTCTTTAGTACTTTATAGCAGGTGAAATTCATTGCTGTTTAATTTTCCACCCTTCTTGTTCTGATTTAAGTTATATCCACTGAGGTTATTGTAGAGGAATAGACTATGTATACTAattatatctatctgtctatctatcactctctctctctttatataaatataagtaaGTGATTGagtatatatctatagataCTATAGATATAAACTATATAGTATCTATCCATTTGCCATAATTCCAGCCTGGAGGTCTCAGTATAAGCCACCACTGCAGAAATATGTTGGACATTTACAATACATAGTTTTGTGCTAGCCTAGattgcagtttttatttggggtgttaaaataaatgttcatggGGTTGAAGGTAACCTTTTCTTCGACTGTATTTATACTTGGAGTAAAGTACTAGTAAGAGCAAGTATCGAGCACAGCTGGCTAATTTCCTCCTGGGTCAGGCCAAGCAAGCAAATCAGACTGGCATTTACTATAAATGAGTGCATCAGATGGATATGTTTGAGGGGGTTTGGGGAATACAGGAGGTGTTCTGCTCAGTAAAGCAGGGGCAGTTGTATTTGCAACTGTGAGAATATTTTGGGGTggagttttttgtgttttgttctgttttgattgtttttagcAGCTATGCACTAATCTGATACATTCCATCGAATGTGGTTTTAACAGTGCTTGGTGTTTGTATTGACATTTATTCATATAAAGGTGTGATATGCATgtaatgtgaatttaaatttgGGTTGTGTTGTTAAATTATTGACATAAAGGTGATTTTATGATCTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009649 True 2167 mRNA 0.47 7 43434412 43439221

Neighbor

gene id symbol gene type direction distance location
AMCG00009648 wdr13,LOC107584863,LOC107552201 coding downstream 2857 43423905 ~ 43431555 (-)
AMCG00009642 NA coding downstream 61141 43345226 ~ 43373271 (-)
AMCG00009644 NA coding downstream 92747 43338664 ~ 43341665 (-)
AMCG00009643 NA coding downstream 95890 43332431 ~ 43338522 (-)
AMCG00009641 dedd,LOC106572035,LOC107665071,LOC107599036,LOC107603111,LOC107755304 coding downstream 102934 43318835 ~ 43331478 (-)
AMCG00009651 porcn,LOC106567241 coding upstream 5352 43444573 ~ 43455887 (-)
AMCG00009650 NA coding upstream 73224 43512445 ~ 43522137 (-)
AMCG00009652 NA coding upstream 166452 43605673 ~ 43644666 (-)
AMCG00009657 NA coding upstream 287985 43727206 ~ 43731531 (-)
AMCG00009665 NA coding upstream 453229 43892450 ~ 43895658 (-)
G58246 NA non-coding downstream 46494 43387183 ~ 43387918 (-)
G58149 NA non-coding downstream 424299 43006601 ~ 43010113 (-)
G58039 NA non-coding downstream 737279 42696897 ~ 42697133 (-)
G57998 NA non-coding downstream 894299 42539439 ~ 42540113 (-)
G57988 NA non-coding downstream 956300 42477721 ~ 42478112 (-)
G58277 NA non-coding upstream 36612 43475833 ~ 43476088 (-)
G58336 NA non-coding upstream 92214 43531435 ~ 43568662 (-)
G58374 NA non-coding upstream 431133 43870354 ~ 43871117 (-)
G58377 NA non-coding upstream 434560 43873781 ~ 43875739 (-)
G58391 NA non-coding upstream 499700 43938921 ~ 43947522 (-)
G58025 NA other downstream 760705 42648850 ~ 42673707 (-)
AMCG00009582 NA other downstream 1378284 42041199 ~ 42056128 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 1607478 41814559 ~ 41826934 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 3276941 40121463 ~ 40157471 (-)
AMCG00009472 NA other downstream 4596818 38827965 ~ 38837594 (-)
G58333 NA other upstream 43200 43482421 ~ 43945297 (-)
AMCG00009672 NA other upstream 550290 43989511 ~ 43995654 (-)
AMCG00009697 NA other upstream 1062566 44501787 ~ 44512249 (-)
G58584 NA other upstream 1102673 44541894 ~ 44542809 (-)
G58589 NA other upstream 1126848 44566069 ~ 44566834 (-)

Expression


Co-expression Network