AMCG00009661


Basic Information

Item Value
gene id AMCG00009661
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 43940293 ~ 43951629 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009661
ATGCCGTGCAGCCGGGAGCAGGACTGCACTGTGCTTGTGGCTCTGATGCAGCTGTGGGTGGTGATGGCAGAATCTTTCACAGTGTCAGTTCCCGTCGCTCCCCTGGTGGCTCGGCTGGGAGATGACCTCACGGTGCCCTGTCACATCTCCCCTGAGGACAGCGCTGTGGCCATGGAGGTGCGCTGGAGCCGAGAGGGGCACACACATCCTGTGCTTCTGTACAGACATCAACAGGAAATTCAGGGCCAGGATTTTGTAGGCCGGCTGGCACTGAGCAGAGCAGGACTGGAGAAGGGCAACGTGTCTCTGGTGATCCGGGAGTTTAGATTGAGGGATGAAGGGCGGTACATCTGCTTTGTGGATTCCGGCTTGCAGTATCACAGAGCAGCGGTGGAAGTGAAAGTCTCCAAATCTTTCACAGTGTCAGTTCCCGTCGCTCCCCTGGTGGCTCGGCTGGGAGATGACCTCACGGTGCCCTGTCACATCTCCCCTGAGGTCAGCGCTGTGGCCATGGAGGTGCGCTGGAGCCGAGATGGGCACACACATCCTGTGCTTCTGTACAGACATCAGCAGGAAACTCAGGGCCAGGATTTTGTAGGCCGGCTGGCACTGAGCAGAGCAGGACTGGAGAAGGGCAACGTGTCTCTGGTGATCCGGGAGTTTCGATTGAGGGATGAAGGACGTGACTGGCAGTGCCCCCCTGGTCTCTCTGGATGGGCACCAGAATTGAGGCATCGCCTTGTCCTGCAACTCTCAGGGCTGGTACCCCCAACCAGAGGTCCAGTGGATAGACCAAGCAGGCAGCCCTTTCACAGTCTCCAGCAGATCCCAGTTCACTCAAACCCCAAACGGGCTGTACTCTGTCAGAAGTCAAATTCTGCTGTCTGGGCAAGAGCAGGGAGCAGTGTCCTGTGTTGTGAGACACGGGCGAGACGGGACACAGGTCCAGTCCAGAGTCTACATCAGCGACAGAAGAAAGCTACGTAAATTATATAACACGGACAGAAGTGATATTTACAAAGATATTACAATGGATCCAGAAACCAGCCACCCAAAACTGAAAGTCTCTGAAGATGGTAAATCTGTACGGTTCGACAAGCAGCTCCAAGGTGTCCCAGACAACCCAAAGAGATACAAATACTGGCCGGGTGTTCTGGGATGTGAGGCATTCTCCAGTGGGAAGCATTACTGGGAGGTGAAGGTTGATGGTTTGGACCACTGGGATCTCGGGGTGGCCAAGGAGTCGGTGTCCAGAGAGCAGGTCGGTGACATTCAGCCCAGTGACGGCTACTGGAGCATCTGGTTTGTCTACAATGAGTACCGAGCTCTGGACAAGAAGAGGACaataataaaacccaaacagACAGTTCAGACAGTGGGCATCTATTTAGATTATGATAGAGGAAGACTTTCTTTCTATGATGTAGAAGAGCAGCTTCACCTGTACACTTTCCACAGCAAGTTCACTGAGAAACTGTATCCTGTCTTCAACCCGTGGGAAAGCACCAACCCACTGGTTTTGATATAACATGACCAGAAGCCCTTAGCACTACCAGCTTTGTGTGTGCAATGAAGGTGTGATGTACTGTACTCAAGGAGATTGTAAAAAGGTTTATGCAATGTCTCACATGCTGTTAATATCTAACACCTCATTGCTGGGGGGTTTTCGCCACATTtggttttattacaaaaaataaatgtctagtATTGCTGTCTCAGCCTTTAAATTGGAATAAGTCCAGACCCACTTAATTGTTGGAATTTATCTCTCAATaaggaaagggaaataaaagaGAATGGGGAAATTAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009661 True 1810 mRNA 0.51 7 43940293 43951629

Neighbor

gene id symbol gene type direction distance location
AMCG00009660 NA coding upstream 37528 43897866 ~ 43902765 (+)
AMCG00009662 NA coding upstream 49822 43880029 ~ 43890471 (+)
AMCG00009659 uba1 coding upstream 66589 43859081 ~ 43873704 (+)
AMCG00009658 camkvl,LOC101077320,LOC105006803 coding upstream 87764 43834883 ~ 43852529 (+)
AMCG00009655 tbc1d25,LOC104943506 coding upstream 183934 43751483 ~ 43756359 (+)
AMCG00009670 NA coding downstream 26963 43978592 ~ 43992050 (+)
AMCG00009668 NA coding downstream 55285 44006914 ~ 44013300 (+)
AMCG00009667 NA coding downstream 62097 44013726 ~ 44022254 (+)
AMCG00009669 NA coding downstream 73915 44025544 ~ 44051535 (+)
AMCG00009676 NA coding downstream 139911 44091540 ~ 44099575 (+)
G58319 NA non-coding upstream 13662 43921474 ~ 43926631 (+)
G58317 NA non-coding upstream 24533 43909588 ~ 43915760 (+)
G58304 NA non-coding upstream 64570 43873781 ~ 43875723 (+)
G58291 NA non-coding upstream 259340 43678351 ~ 43680953 (+)
G58214 dedd,LOC108411641,LOC107758014,LOC107699191,LOC107603111 non-coding upstream 615714 43318916 ~ 43324579 (+)
G58467 NA non-coding downstream 217856 44169485 ~ 44169789 (+)
G58510 NA non-coding downstream 373522 44325151 ~ 44325573 (+)
G58513 NA non-coding downstream 376642 44328271 ~ 44360062 (+)
G58527 NA non-coding downstream 461643 44413272 ~ 44483247 (+)
G58666 NA non-coding downstream 941216 44892845 ~ 44893078 (+)
G58324 NA other upstream 4531 43932952 ~ 43935762 (+)
AMCG00009647 NA other upstream 495873 43436990 ~ 43444420 (+)
G57830 NA other upstream 1862052 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 2341169 41596229 ~ 41599124 (+)
G57604 NA other upstream 2945634 40990802 ~ 40994659 (+)
G58522 NA other downstream 434868 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 610148 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 632933 44584562 ~ 44603609 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other downstream 681121 44632750 ~ 44651967 (+)
AMCG00009706 pim1 other downstream 798547 44750176 ~ 44760058 (+)

Expression


Co-expression Network