AMCG00009665


Basic Information

Item Value
gene id AMCG00009665
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 43892450 ~ 43895658 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009665
GGTGCTCTGGTCCGTGTTGCAGGGGCGCAGATCGTGACTTGTTACAGCAGCTTTGACAAGCGCACGGGCGAGTGCTCGGGCCTCCTGGGCGACGGTGTGGATCAGGACGACTGCTGCCTCAACCAGGCCTACGGCTTCATCAATGACAGCGGTGCATGCCAGTCTTGTGGTCCGGCCACCTGGAGCGAGTGGAGCAGCTGGGGTGCCTGCACCGTCACCTGTCTGGAGGGGGTGAAGCAGCGGCGGCGGCGCTGCGATGGTGTCGGCGAGTGTCCCGGCAACAGCGCGGTGTTGGAGACGAAGTCCTGCTCGGACCAAGACTGCTGCCCAGGGTCGGGCGGGTGGACGGATTGGGGGTCCTGGCAGCCGTGCTCGGTGACGTGCAAGTCTGGGACGAAAGTGAGACGCAGGAGTTGCACAGCGCCGCCTCCTTCCTGTGGGGGGAGCTGCTATGGCACAGACACTGAGACTGCTTCATGCGACACTTTTCAGGAATGTCCAATCCATGGCGGCTGGTCGGCCTGGGGTGCGTGGGGCAAGTGCTCCGGCAGCTGTATCTGGGAGCAGCCCCGGTTCGTCCCCACCCGCACTCGCATTCGAACCTGCACCAACCCCGCCCCCTCCTTGAGCCCCCCTGGCCGCCCCTGTGGGGGTCAGACGGAGGAGCAAGAAGACTGCTCCAGTCTGCCCTTCTGCCCCGtGGATGGTGGCTGGAGCCAGTGGAGCCCGTCCGGCTCGTGTTCGGTAACCTGCGGACTGGGGCTCCGGCAAATGACCCGGCAGTGCAACAGCCCGGCGCCCAAACACAATGGCCGACCTTGTGTAGGCAGCACCACGAGCAATGCCCTGTGCAACACTGCCACGCACTGTCCAGCGGATGGCCAGTGGAGCGAGTGGACAGAGTGGACCCTGTGCTCGCGCGCAGGAAGGAAAATCGATTGCAAGCGTACCGGTGGCACACAAAGACGCACACGGGTGTGCAAGGGGCAAGCTTTTGGTGGGAATCCATGCCCCGAAGATTATTCTGAGTCTCGCGCCTGCTACTACCTGAAAGACTGCATTAtgaAGGGCAAAGAGTGGTCCGAGTGGAGTGATTGGGGGTTGTGTGAGCCCAGCTGTGGACCGGACTCTCAGAAAGCCCGATCTAGAAACTGTAAACCGGACCTCACAGAGTACAGTACGGAAGTGGGGATACATGACGCTGAGGCGTTTTTCTGGGGCACCCCTCGCGTGAACTGTCCGGAGTTGGAGGGCCAGAGACGAAAGCTGGAGCAGAAGGAGCCCTGTTTAAACGTCCCAGAATGCACC

Function

GO:

id name namespace
GO:0006955 immune response biological_process

KEGG:

id description
K15412 CFP; complement factor properdin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009665 True 1308 mRNA 0.62 8 43892450 43895658

Neighbor

gene id symbol gene type direction distance location
AMCG00009657 NA coding downstream 160919 43727206 ~ 43731531 (-)
AMCG00009652 NA coding downstream 247784 43605673 ~ 43644666 (-)
AMCG00009650 NA coding downstream 370313 43512445 ~ 43522137 (-)
AMCG00009651 porcn,LOC106567241 coding downstream 436563 43444573 ~ 43455887 (-)
AMCG00009649 NA coding downstream 453229 43434412 ~ 43439221 (-)
AMCG00009663 NA coding upstream 6637 43902295 ~ 43918770 (-)
AMCG00009666 LOC105890655,LOC108438067,LOC106566835,LOC106572042,LOC105026930,LOC107558917 coding upstream 28763 43924421 ~ 43930718 (-)
AMCG00009664 NA coding upstream 37569 43933227 ~ 43935758 (-)
AMCG00009671 NA coding upstream 101054 43996712 ~ 44006803 (-)
AMCG00009677 NA coding upstream 155752 44051410 ~ 44064467 (-)
G58377 NA non-coding downstream 16711 43873781 ~ 43875739 (-)
G58374 NA non-coding downstream 21333 43870354 ~ 43871117 (-)
G58336 NA non-coding downstream 323788 43531435 ~ 43568662 (-)
G58277 NA non-coding downstream 416362 43475833 ~ 43476088 (-)
G58246 NA non-coding downstream 504532 43387183 ~ 43387918 (-)
G58391 NA non-coding upstream 43263 43938921 ~ 43947522 (-)
G58394 NA non-coding upstream 76606 43972264 ~ 43972630 (-)
G58395 NA non-coding upstream 81627 43977285 ~ 43977486 (-)
G58452 NA non-coding upstream 201618 44097276 ~ 44104710 (-)
G58456 NA non-coding upstream 213678 44109336 ~ 44109715 (-)
G58025 NA other downstream 1218743 42648850 ~ 42673707 (-)
AMCG00009582 NA other downstream 1836322 42041199 ~ 42056128 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 2065516 41814559 ~ 41826934 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 3734979 40121463 ~ 40157471 (-)
AMCG00009472 NA other downstream 5054856 38827965 ~ 38837594 (-)
AMCG00009672 NA other upstream 93853 43989511 ~ 43995654 (-)
AMCG00009697 NA other upstream 606129 44501787 ~ 44512249 (-)
G58584 NA other upstream 646236 44541894 ~ 44542809 (-)
G58589 NA other upstream 670411 44566069 ~ 44566834 (-)
G58653 NA other upstream 887260 44782918 ~ 44785134 (-)

Expression


Co-expression Network