AMCG00009671


Basic Information

Item Value
gene id AMCG00009671
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 43996712 ~ 44006803 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009671
CGGCGGTGTCACTGCGGCGCCGCGGAGAAGGGCAAGACATGCCAGCAGTTTAGTGCGACACGTTACTGTACATAACGGGAGGTTGAGCCGCACAGCGTGCACTTTTAAATTGTGCACAACATGATTACAGTTAGGTAATTACCTGAATTTGCCgactgtgtccctctgtgtgaGGGAGACAGAGGTGTGACtaaatatagaaagaaagagagtgGGAGGACGAGATTAGAAAAGATTAAGACAATAATCTTCTAAATtcacaacagagagagagagagaacagacaCTGCCTGTATAGACATAACACTCCTCACCAATTTACTGCCTGTGGCTCTAGTGCTGCCTTGGACACCTAAACTGAGGAGAACAAAACCATCTGTAGCAGCAAGGGATATAACCATTGTTAAAACACTGGGGTTGTGGGCGATGGGATTAAACTTCAAATCTTCTAATCTGTTTTCTCAACATATTAGTATCATCGCTGTCTGAGGACCCCCCCAGTTACCCATTGTCGAGGGGACGGGGAGGGGGATGCCAGGAGCTGCTGCCACAACCATGGAGGACTCCTGCCAGGCTCTGTGTCGCTCACTGGTTACCCACAATACCTTGCAGCAGGAAGGGACGGACATTTCCCAATCTGTCTTGTACACCTCGCTAATGGGGCTACTGCTGGTTACAGAGAAAGAGAAACAAGCCAGTGTAACTCTGGGGAGCGGCCAGCTTGGGATTTGCAATGTGGGAAACACGTGTTTCCTCAACGCCGTGCTGCAGTGTCTGTCTCACACTCTGCCTCTCAGGGATTACTGTCTGAGTGAAAAGTATCGGCAGGAAATGAGCTCCCAAAAAGACCCTGAACTCATGGATGCCTTCTCCAGGGTTCTGTCGGACCTCTGGGCGGAAGAAGGGGCAAGCCCAGTGCACCCTGGGAGATTTTTCTCCCTGTTCAAAGAGTCAGTGCCTTGTTTCAATGGCTACAGCCAACAAGACGCCCAAGAATTCCTGCGCTTCCTGTTGGACAGACTCCACTCCGAGATCAATCGCCGGTCCCCACGCAACCCACCCAGTGCTGACCTCCCAGAGAGCAAACGCCAGCAGCTGAGGGTGGAGGAGAGAGCATCTCTGATGTGGAACAGGTATCTGGAGAAGGACGACAGCAAAATCGTGGatCTGTTTGCTGGGCAGCTGCGCAGTTCCCTGTGCTGCTCTACCTGTGGTCACCAGTCGACCACTTTCGATGTCTTCTGTGACCTCTCTCTGCCTATTCCCAAGAGAAGTGTCTCCGGAGGGATTGTGGCTCTAAAGGACTGCTTGGATCTCTTTTCCCAAGAAGAAGACCTGGATTCAGAAAACACACCTATGTGTGACAGATGTGGCAAGCGGACCGAGGGCACGAAGAAACTCACCATCCAAAGATTTCCCAGGATCATTGTTCTGCATCTCAACCGTTTTGCTACCTCTCGAGTGTCCATCTGCAAGAGCACGGTCTCCGTCTCCTTCCCCCTGAGGCAGCTGGATCTGAGCTGCTACGGAGCGGAGGGCACAGTTCGTGATATTGTGAGAGTCAGTCCAGTGACAGAGTCCCAACTGCAGTCAAACCAGGCCTATTTACTCTTCTACGAGATGGACAGCTGCGATCTCAGAAAGGCTCAGAAACCCCTTCCTGCTCAGACCTCACTGTGAAAATCTGCGCACCCTTCTGCCATACCAACGGCATGGGCCATAGAGATCGAGAGCCAGAGAGTGAGGTAGAGCAGATACAATTTCAAAGTACTTCTTGGCTATCTGAAATTGCTCTGTCAGGTGCAGATTACTTTCCATTTCCTGGGGGCTCTGATGGAGATGTGTCCTGTCATTATATTGGCAGCCAAGCATGCTTGAGAGGCAACCCTGCCGTTCCGCTGTCACCACTTACCAGTTTTCTGTGTTTACACAACCATTGCACTGGGTCGGACTAAACACGTGGAGGCAGGAATCAAGTCACCAAACTCAGGTTGATGAGAGcaattttcagtttcaagtAAAGTCTTGGACTCAGTTTACCAGGGCTTCTCGTTGGAGCTGAGACTCTGGAGGTCCTTCAAGAAACGGCCACATGAGAGGCCTGCACTGAGAATTGGACCAGTGGGCGTGAAGGAGTGGGCCGAGTTTCTGAGTCTTCTGTCTAGTGCGTCACCTTTCTTGTGTTCGTCTGTTTCAGATGTAAGGCCGTTTGATCTTGCCGTTTTTATCAGTTGTGATGAGAGCTGGGTTGGACATTAGTGACCACTGCAGCTTGGTTAACCAGCTTGTTAGTTACTGGGAAAAAATCTAAAGGCATCTCATATCCACAGGTCTGTGATGCCAAGGACAGTTATAATTAGGCCTGAAAGAACAGGTTCTCTGGGGCCCATTCCACTGCCCCTCTTGCTTTGTCTTAATAGTCCATTAAGTTGCTCTGCCAATAGCTGAGCAGTAGAGCTTCAGAAAACTAAATCAAGCTCAATAGCACAACACCAGTTCCTAAACAATAGCTAGAACAGAACTATAATTCTCACTATCTGAGATCACAGTGACTCATTTACTTTCGTTTCCCGTCTCTGGTGTGCAGTTTACCTTAACTTATCCTACACAGTCTGTGACAGTTATATAGAATTGACATATTGGCCAGGAAAGCATTGCTCCTGGGGAAATTGCCATTGAATCTGATTCTTTCATATCTCCAGCCCTGGTACTTTTTTGAACAGAACTGCCTTGTGCACAACTGCTGAAAAGACTGATAGCATAATACTGAGATTATTgtagaaaaaaattataatagatGATTGTATCTGTGGTActgtttgaataatttatttattgtatctgtgctgctgttttcttttgctgtaaTGACTGTAATTCCTGTTCAGGTTCATGAGAATGAGAAATaataagtacaaataataataataaaaataatgtctg

Function

GO: NA

KEGG:

id description
K21634 USP21; ubiquitin carboxyl-terminal hydrolase 21

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009671 True 2943 mRNA 0.48 13 43996712 44006803

Neighbor

gene id symbol gene type direction distance location
AMCG00009664 NA coding downstream 60954 43933227 ~ 43935758 (-)
AMCG00009666 LOC105890655,LOC108438067,LOC106566835,LOC106572042,LOC105026930,LOC107558917 coding downstream 65994 43924421 ~ 43930718 (-)
AMCG00009663 NA coding downstream 77942 43902295 ~ 43918770 (-)
AMCG00009665 NA coding downstream 101054 43892450 ~ 43895658 (-)
AMCG00009657 NA coding downstream 265181 43727206 ~ 43731531 (-)
AMCG00009677 NA coding upstream 44607 44051410 ~ 44064467 (-)
AMCG00009678 NA coding upstream 67047 44073850 ~ 44074116 (-)
AMCG00009683 NA coding upstream 249612 44256415 ~ 44264122 (-)
AMCG00009690 gdi1,LOC105013583,LOC106567106,LOC106572620 coding upstream 278075 44284878 ~ 44293118 (-)
AMCG00009693 NA coding upstream 317182 44323985 ~ 44328354 (-)
G58395 NA non-coding downstream 19226 43977285 ~ 43977486 (-)
G58394 NA non-coding downstream 24082 43972264 ~ 43972630 (-)
G58391 NA non-coding downstream 49190 43938921 ~ 43947522 (-)
G58377 NA non-coding downstream 120973 43873781 ~ 43875739 (-)
G58374 NA non-coding downstream 125595 43870354 ~ 43871117 (-)
G58452 NA non-coding upstream 90473 44097276 ~ 44104710 (-)
G58456 NA non-coding upstream 102533 44109336 ~ 44109715 (-)
G58457 NA non-coding upstream 103166 44109969 ~ 44110283 (-)
G58459 NA non-coding upstream 108847 44115650 ~ 44121067 (-)
G58511 NA non-coding upstream 318354 44325157 ~ 44325573 (-)
AMCG00009672 NA other downstream 1058 43989511 ~ 43995654 (-)
G58333 NA other downstream 51415 43482421 ~ 43945297 (-)
G58025 NA other downstream 1323005 42648850 ~ 42673707 (-)
AMCG00009582 NA other downstream 1940584 42041199 ~ 42056128 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 2169778 41814559 ~ 41826934 (-)
AMCG00009697 NA other upstream 494984 44501787 ~ 44512249 (-)
G58584 NA other upstream 535091 44541894 ~ 44542809 (-)
G58589 NA other upstream 559266 44566069 ~ 44566834 (-)
G58653 NA other upstream 776115 44782918 ~ 44785134 (-)
AMCG00009739 NA other upstream 1162138 45168941 ~ 45230457 (-)

Expression


Co-expression Network