AMCG00009672


Basic Information

Item Value
gene id AMCG00009672
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 43989511 ~ 43995654 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009672
ATGCTGAGATTGAGCGTTGCTGGGATTGTGACTCTGCTGCAGGTGTGCAGGGTGACAACAGAGTCCTTCGCTGTCTCAGTTCCCACCGCACCCCTGGTGACTCGGCTGGGCGATGACCTCACAGTGCCCTGTCACCTCTCGCCCGCTGTCAGCGCTGTGGCCATGGAGGTGCGCTGGGCccgagagagcgggagagaccCTGTGCACGTGTACAGGCAACACCAGCACACACAGGGCAGGAACTTCTCAGGCAGGACTACCCTGAGCAGAGCAGGGCTGGAGAAGGGGGATGTGTCTCTGCTGATTAGGGACCTTCGAGTGGCAGATCAAGGGCGCTACACCTGTTTTGTGGATTCAGGCTCCTTCTATGACAGAGCAGAGGTGGAGGTGAAAATCTCCATGACTGGCAGTGCCCCCCTGGTCTCTCTGGATGGGCACCAGAGTGGAGGCATCGCTCTGTCCTGCGAGTCCGAGGGCTGGTACCCCCAACCAGATGTCCAGTGGAAAACCAAACCCAGAACCACTTTGTCAGCTGCCCCCAGGTCCCACATCACCCGAACCCCAGACGGGCTGTACTCTGTCAGGAGTGACCTTCTGCTGCCGGGGCGGGCAGGAGGAGCAGTGTCCTGTGTTGTGACACACGGGGGAGACAGGACACAGGTCCAGTCCAGGGTCTACATCAGT
>TU73015
gtttgctacAAATGCAGGTAAGTGATTTCATCTGAAGTGTTGGGACGAGTTTTCGGTGGATGTTTTGCCTCGAGAGTCTTGTTTTTTTGCGGAGCTCGATGCATTAATTTCAGGCAGAATTTAGAGGGGGACCATCACACTGGCAAATTAAAGGAGTGATACTGTAATCCCGGTGTGGGGACCATGCTGAGATTGAGCGTTGCTGGGATTGTGACTCTGCTGCAGGTGTGCAGGGTGACAACAGAGTCCTTCGCTGTCTCAGTTCCCACCGCACCCCTGGTGACTCGGCTGGGCGATGACCTCACAGTGCCCTGTCACCTCTCGCCCGCTGTCAGCGCTGTGGCCATGGAGGTGCGCTGGGCccgagagagcgggagagaccCTGTGCACGTGTACAGGCAACACCAGCACACACAGGGCAGGAACTTCTCAGGCAGGACTACCCTGAGCAGAGCAGGGCTGGAGAAGGGGGATGTGTCTCTGCTGATTAGGGACCTTCGAGTGGCAGATCAAGGGCGCTACACCTGTTTTGTGGATTCAGGCTCCTTCTATGACAGAGCAGAGGTGGAGGTGAAAATCTCCATGACTGGCAGTGCCCCCCTGGTCTCTCTGGATGGGCACCAGAGTGGAGGCATCGCTCTGTCCTGCGAGTCCGAGGGCTGGTACCCCCAACCAGATGTCCAGTGGAAAACCAAACCCAGAACCACTTTGTCAGCTGCCCCCAGGTCCCACATCACCCGAACCCCAGACGGGCTGTACTCTGTCAGGAGTGACCTTCTGCTGCCGGGGCGGGCAGGAGGAGCAGTGTCCTGTGTTGTGACACACGGGGGAGACAGGACACAGGTCCAGTCCAGGGTCTACATCAGTGacAATTTGAAGACAAAGGATGATATTTTGAAGTTAAATAATGTGCTAGGTGCACAGAAAGAGATAGAGGAAGCTCGGAAGTATAAAGAAACAATAACATTGGATC

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009672 False 684 mRNA 0.60 3 43991714 43994848
TU73015 True 973 TUCP 0.55 8 43989511 43995654

Neighbor

gene id symbol gene type direction distance location
AMCG00009664 NA coding downstream 53753 43933227 ~ 43935758 (-)
AMCG00009666 LOC105890655,LOC108438067,LOC106566835,LOC106572042,LOC105026930,LOC107558917 coding downstream 58793 43924421 ~ 43930718 (-)
AMCG00009663 NA coding downstream 70741 43902295 ~ 43918770 (-)
AMCG00009665 NA coding downstream 93853 43892450 ~ 43895658 (-)
AMCG00009657 NA coding downstream 257980 43727206 ~ 43731531 (-)
AMCG00009671 NA coding upstream 1058 43996712 ~ 44006803 (-)
AMCG00009677 NA coding upstream 55756 44051410 ~ 44064467 (-)
AMCG00009678 NA coding upstream 78196 44073850 ~ 44074116 (-)
AMCG00009683 NA coding upstream 260761 44256415 ~ 44264122 (-)
AMCG00009690 gdi1,LOC105013583,LOC106567106,LOC106572620 coding upstream 289224 44284878 ~ 44293118 (-)
G58395 NA non-coding downstream 12025 43977285 ~ 43977486 (-)
G58394 NA non-coding downstream 16881 43972264 ~ 43972630 (-)
G58391 NA non-coding downstream 41989 43938921 ~ 43947522 (-)
G58377 NA non-coding downstream 113772 43873781 ~ 43875739 (-)
G58374 NA non-coding downstream 118394 43870354 ~ 43871117 (-)
G58452 NA non-coding upstream 101622 44097276 ~ 44104710 (-)
G58456 NA non-coding upstream 113682 44109336 ~ 44109715 (-)
G58457 NA non-coding upstream 114315 44109969 ~ 44110283 (-)
G58459 NA non-coding upstream 119996 44115650 ~ 44121067 (-)
G58511 NA non-coding upstream 329503 44325157 ~ 44325573 (-)
G58333 NA other downstream 44214 43482421 ~ 43945297 (-)
G58025 NA other downstream 1315804 42648850 ~ 42673707 (-)
AMCG00009582 NA other downstream 1933383 42041199 ~ 42056128 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 2162577 41814559 ~ 41826934 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 3832040 40121463 ~ 40157471 (-)
AMCG00009697 NA other upstream 506133 44501787 ~ 44512249 (-)
G58584 NA other upstream 546240 44541894 ~ 44542809 (-)
G58589 NA other upstream 570415 44566069 ~ 44566834 (-)
G58653 NA other upstream 787264 44782918 ~ 44785134 (-)
AMCG00009739 NA other upstream 1173287 45168941 ~ 45230457 (-)

Expression


Co-expression Network