AMCG00009676


Basic Information

Item Value
gene id AMCG00009676
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44091540 ~ 44099575 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009676
ATGCTCTGCTTCTgtctcctcccaggtggcctcTTTGGATTTAATGTCCCGGTGGCAGAGACAGTCCATTTCCGCTGCACTGCTCCCTCCCTGCTCTACACCAGCATTGACTTTGACCTGTACCAGGACACGGCCGGAAACCCCATTGTGACCCAGAGGGCTGAATTTCCACAGACCACAGTGGAGCTGAATGTGTCTAATGTGGAGCCGTCGCACCAGGGCAGCTACAGCTGTCGGTACAGAGTCCAGGGGGGCGCAGAGGCCTACAGGTCACCTCACAGCAACTCTATAACCATCACCATGGTGGTCCTTCAGCAGCCCAACATCTCCCTCAGCCTCCCTGCTGCAGAAGTGACCAGGGGCACGAGCTTCAGCATCACCTGCTCCACAGAGCCACAGTACGCAGGGGGCACCTTTCACCTGATGAGGATTGAGCCCAATGGAACCACCATCCAGTCAACACCAGCTGTCAATCACTCTGCCACCTTCTCCTTTCCTGCTGCTGAGTATTCCCACCAGGGGAATTACAGCTGCCGCTACAACACAAGAGTGTCCACTCGTAACTTCTCCTCTCCTGAAAGTGATGTGCTGGTCATCACAGTGAGAGGTACTATGTCCACAAGATCAGTCATTTATAGTCTAAATACAAGGACAGTCGTGTCCGGGGTGACCTCGGTGCTGTTGGTGGTGGTGATATTCCTTGTCATCATCCTTGTGATGCGTAAGAAAAGGAGGAAAGCCACAGAGctgaagagagagagcataATACTGGCCATGAACACCTACACATGCAACCAGTCCAGGCACAGTGAGGATGAGGACGAGTTTGAGgatgatgaggatgaggatgattACGTGAACGCAGAGGTCTTCAAAGGGAAGCCTGATTACGCAGAGGAAGATGAGGACAGCGATGACTATGAGAACTCAGACCCCTCATACATGAAGGCACAGGCTTGCAGAGATatagaggaggaagaagagaatATATACCAAAACTATGGCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009676 True 1008 mRNA 0.52 5 44091540 44099575

Neighbor

gene id symbol gene type direction distance location
AMCG00009669 NA coding upstream 40005 44025544 ~ 44051535 (+)
AMCG00009667 NA coding upstream 69286 44013726 ~ 44022254 (+)
AMCG00009668 NA coding upstream 78240 44006914 ~ 44013300 (+)
AMCG00009670 NA coding upstream 99490 43978592 ~ 43992050 (+)
AMCG00009661 NA coding upstream 139911 43940293 ~ 43951629 (+)
AMCG00009675 NA coding downstream 4221 44103796 ~ 44112657 (+)
AMCG00009674 NA coding downstream 13836 44113411 ~ 44122931 (+)
AMCG00009673 NA coding downstream 28708 44128283 ~ 44142154 (+)
AMCG00009679 NA coding downstream 61007 44160582 ~ 44161239 (+)
AMCG00009681 NA coding downstream 99941 44199516 ~ 44205254 (+)
G58319 NA non-coding upstream 164909 43921474 ~ 43926631 (+)
G58317 NA non-coding upstream 175780 43909588 ~ 43915760 (+)
G58304 NA non-coding upstream 215817 43873781 ~ 43875723 (+)
G58291 NA non-coding upstream 410587 43678351 ~ 43680953 (+)
G58214 dedd,LOC108411641,LOC107758014,LOC107699191,LOC107603111 non-coding upstream 766961 43318916 ~ 43324579 (+)
G58467 NA non-coding downstream 69910 44169485 ~ 44169789 (+)
G58510 NA non-coding downstream 225576 44325151 ~ 44325573 (+)
G58513 NA non-coding downstream 228696 44328271 ~ 44360062 (+)
G58527 NA non-coding downstream 313697 44413272 ~ 44483247 (+)
G58666 NA non-coding downstream 793270 44892845 ~ 44893078 (+)
G58324 NA other upstream 155778 43932952 ~ 43935762 (+)
AMCG00009647 NA other upstream 647120 43436990 ~ 43444420 (+)
G57830 NA other upstream 2013299 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 2492416 41596229 ~ 41599124 (+)
G57604 NA other upstream 3096881 40990802 ~ 40994659 (+)
G58522 NA other downstream 286922 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 462202 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 484987 44584562 ~ 44603609 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other downstream 533175 44632750 ~ 44651967 (+)
AMCG00009706 pim1 other downstream 650601 44750176 ~ 44760058 (+)

Expression


Co-expression Network