AMCG00009682 (si:dkey-96f10.1,LOC106609077,LOC108427753,LOC105900165,LOC108276060,LOC107704228)


Basic Information

Item Value
gene id AMCG00009682
gene name si:dkey-96f10.1,LOC106609077,LOC108427753,LOC105900165,LOC108276060,LOC107704228
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44235551 ~ 44254047 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009682
CGTAGCAAAGGACCTTTTGGGAGAGGGGTTGGACCCTAATCCTGCCAACAGCACCAAAGAGTGGTGGGTGTCTGGCATGAGCTACCCCGTCCGCCATGCTGTTGGAGTGGATTCTCTTGGTCCCAGACATACTACTGCGGTCACCGGGGGACGGGACAACAGAGTGGCAATGTGGAATAGTACAACTGTTGCCAGCTGTTCTCAGTCTGTACAGAAACAGTGCCAGTTAAGTCGCAATGTAGGAACAAAGTTGCGCACAGGCTTTGCGCTGCCCGACCGCCCGCTGTGCCACTCGAGCCCCCGCGGCGGCTGCAGGCTCGGGCACAGCTGGGCACAATGGCAGTGCCCGCCTCTGCATGGTGCGGCTCCCGGGATGGAGGAGGGGGTCGAGTGGGAGGACAGTGTCCCGGCCCACGCCGCTGCTGGCCTCTCAcgcaacccccccaccccccaaggCCGGCCTCCAGGCTCTCGTCAGGTGATGATCGAGGCAAAGTTCGCCCATGCATGCGAAGCGCGGCTCACTCACGATCACCGCCGCGGCGAAAGCGCTCAGTGCCGAGCCATTGTTGTCTCAGCTGGCGAAAGGAAGGATACTTTCCGGGGGAACATGTCCCAGGAGAAGGCAGAGCTCACCCAGACGCCGCTGCAGAAGATCTGGGTGCCCTGGATGCAGGCGCAGCTGCAGAAGCGGCGAGGGTCCTCTGTTCCACAGTTTACCAACTCACCCACCATGATCGTCCTGGTGGGGCTCCCGGCGAGAGGCAAAACCTACATCTCCAAAAAGCTCACTCGCTACCTCAACTGGATCGGTGTGCCCACCAAAGTGTTCAACGTGGGACAGTACCGCCGGGAAGCTGTGAAGACGTACAAGAGCTTTGATTTCTTCAGACCCGACAACAAAGAGGCCATGAAGATCCGGAAGGCCTGCGCTATAGCGGCTCTGAAGGACGTCTGCACCTACTTCACTCAAGAGCAAGGACAGGTCGCGGTCTTCGATGCCACCAATACAACCCGAGAGAGAAGGGAGGTGATACTCAGCTTTGCCAAGGAAAACGGTTACAAACAAGTGAAGCTCAGCAGCCCTGACTACAAGGACTGTGACAAGGAGGAGGCGGTGGAGGACTTCCTGCAGAGAATCGAGTGCTACAAGATCACCTATGTCCCTCTGGACGATGAGCTGGACAGGAATCTCTCCTACATTAAGATCTTCAACGTGGGCAAGCGGTACCTGGTCAACCACGTGATGGATCACATTCAGAGCAGGATCGTCTACTACTTGATGAACATCCACGTTGCGCCCCGCTCCATCTACCTGTGCCGGCATGGCGAGAGCGAGCTCAACTTACTGGGCCGGATCGGGGGGGACTCGGGGCTGTCCAAACGTGGCAACCAGTTTGCTGGCGCTCTGGCAGGCTTCATCCAGAGCCAGTCCATCAGGGACCTGAAGGTATGGACCAGCCATATGAAGCGAACCATCCAGACCGCCGAGGCGCTGGGGGTCCCCTATGAGCAGTGGAAAGCCCTGAACGAGATCGACGCGGGAGTGTGTGAAGAGATGAGGTACGAAGAGATCCAGGAGAACTTCCCAGAGGAATTCGCCCTGAGAGACCAGGACAAATACCGCTACCGCTACCCCAAGGGAGAGTCCTACGAAGACCTGGTACAGCGGCTGGAGCCAGTGATCATGGAGTTGGAGAGGCAGGAGAACGTGTTGGTCATCTGCCATCAGGCGGTCATGAGGTGTCTGCTGGCCTACTTCCTAGACAAGAGCGCAGAGGAGCTCCCCTACCTAAAGTGTCCGCTCCACTCCGTGCTCAAACTCACTCCTGTCGCCTACGGCTGCAAGGTAGAGTCCATTTTTCTGAACATCGAAGCCGTCAACACTCATCGAGACAAGCCCGTGAACGTAGAAATCAACAGAGACCCGGAAGAGGCTTTGATAACCGTCCCCGAACATATATAAGAAAGCCTGGAGAAAGCACGAACGGCTGGACAGAGAGCAGTGGACGAGAGGGTTGAAAATCGTTGACTCTTTCGGTGCTTTTTACCTCTGGTACAacttcattttgcatttttttttttttttttgcaatccATTTTTAACTTATTCTATAAATGCTGCTGTAAGAACAGGTGCAGAGTTCATGGACTGCCCCCAGCTGCTGCAGGATTTAGGATGCTTTGAAATATCAGGGATTGTCGTTCAGGGATGCAGGGCCTTTCACAGCATCCAGGCAGAGAAGACTACGGTCCTTTTGATGCTCTGAACCTTACCGGTTGGACCACAGTCACCGTCCAACGTAAACTCTGGGGAGGGATGTAAACGAGGGAGATGAAGAATGTATCTGATTGTGACGGAAAGGAAGCAGAATTGAAATCATATATTTAGCCAATAATTATTTTGACCAGATtaattgagtgttttttttttgtttgtttgtttacggTTTCTCTTTTTGGTCAAAGACTTGGAAGTTATTCaaggtttattttgtaatttttttttatgttagcattttaatattttataaaaccttgcaatatacatttaaaaaaattcacCTTATTTCCAATTACATTGTGACACTTTAACACAAACTGCAGAGCTTGAgatcatttcatatatattccTTGAAGCTGACACCGACAGAGGGGAAGGAATTAGGGGTTGCGCCGGCTCTGTACCTTGTGCAACACTCATTTGCTTCCCCCTACCTGCACAATTCGTGCTCAGCTTTATTAACACTGTTCAGGATCCTGCCTGCACATGCTGCAACACTGACAGGCAATCAGGCAGGACACCACTGAGGGGAAATAAGACCATCCGGACTCCCTCAGTGAGGTATAACTGTACACTTGACCCACAGAGCTTAGCGGTGCTGCAGAAGAAAGCATCTTCCCTAGATTGGCATAAGGTTGAggattttctgaaatgcatccAAAGCCTGATGACACTGTATGACGACACCATGTCAGACATGCCTCGGTAGACCTGCCCAAGAGGAGGTCCGCTCACAGAGGCCATGTGAGTCTCGTAGCCCCAGTGTCCACAAGTGACATTTGTGCGGGAGACTTGGTGTGCATATTGGTTCGCACCCTCTACAGCTCCCGTGGTTCTCTCTACCAGGGCCAGAGTCCAGAATCCTGGTCCCAGTGAGAGACCCAGATCTCCTCAGTTTTGTAGCTCACCACTTTTCTAGAGGCTTGGGAACACACATTAATTATTGAGACATTCAGCAAGTCTCATCCCCTCACTTGTCAATGAGGGCAACTCTGATCTTGGGGGGCGACTCAGTGTCTGGCTTGATTCTATATTAACAAACAATAGGTTTTAGTTTGATAACCAGGATGTGAAGTCGTGAAACTCAGGTAATAGTTTATCAAATTCATGGCGAGGCTTTAAGGCAGTTTGAATCGAGGCCAGACTATTCGATGCTGCAAATGAAGACTGTTTGCTGCTGTCTGATGTACACTGTATCCAAGACTCAGTTGATGACTGTTATTCCCCtatctgtatttactctgtcGGCAGCATGAAAAAGAATCGGGGACGGAGTAGAGGACATGCGTTGTATATTCTGTGTTAAACCTACCTTGTGTCTTCCAATACCTTTACAATGAAGTCCACTCGGAGCGCAGGTTGGGCCCCACGGTCCTGACAGCACTGGTTCCGGTCTGGCCCGTGTCATAAGCCCCCTTTCACACTAGCACACAGGGTGGGTGTATGTGGCATTGCGCAAGCTCGGGTGGGCTCCAGTTAGTGACTCCTGTATCTAATCGCGTAAATATTCAAGAACCAGCCTGCCACTGACAGTGTGGGGCTCTTTGACTGTTGAATGTACTgtgctatatatttatataggaaTAACTAGCTGCATGAAGTAGTTATTCATATACTATAGTTACAAGAGGGTGCAAAACATATATAGGGCCGACTGTATCAGTCACAATAGGGGCTGTGCAGGGTCTAGCTGTACTGGGTTGTTTTTCTGAACCAACACCTTTCCATTCCATTTAAATCCTACAGGTACGTCCTGCTGCGATGTTTAACAGTCAGATGTTGCCTTGGTAATGCATTTCTTCCATGATATCCAATGCAGTTGCTCTTTAACAAACAAGCAAAGCCAGAGCAGCTCACGGCTCCAGTTCAGGcttcaaaattaaatgcaagaaaCTGCTAGTTACAATACTGTTTGTTTCTGCATGGATTTAATGTGACAACGATTGGCGAGTAAAaagaatttaaagaaaattctACTATTCCATTTCGGTAGACAACAAGCAGCACAAGAACCCAGTTTTAATGGGACCACGTTCAAATGGAAATGTTCGGTTCAGCGATGGCTCAGAAGAGCTGGGCTCCTCACGGGCCTAATATCAGTGACTCGGCTCCTCGCACCGGACTGAAACACACCGCCGGTGTCCACGTGGCCACGGTGCCCTCGCTGTGCAGGGAGAAGTGGAAGTAGCACAGATGTGTGGAAGCTCAGATGCatttcccctctcctctctggaATATCTCTGGTGGCTCTCTGTCTGATTTACAGGTGACTGACTTCCTGAGTCTACTTTGAACTCCAGCCATTCACAATAATAAAGGAAGTTTGACTAAATTAATGTAAGAGGATTCAAATAGACTGTGAAACACATGGGTTCTGGATGTTATCAGtcctaataaaaaaaatactgattcTATTTTGTAGAATAAGATGACTATTATACAGACctgtcattgtgttttgttgtagGTGTTTTGGGTGGAGGGGTTAGTGGATATAAATACACTTGCTACAAAGGTTCAAAAGGGGACAAATTCccctaaaaacacaaaaactttcaaaataaactaatgatTGATGTGTGGAGTGGAAAACTTTGTGAGGAGAATGCATGACGTCAGTCTCGGCAGATATCTGATATATGTCCGTGAGGAGGgtacattttaaactatgcTAAACCAGAGTTTGCACTTAAAT

Function

symbol description
si:dkey-96f10.1 Predicted to enable 6-phosphofructo-2-kinase activity and fructose-2,6-bisphosphate 2-phosphatase activity. Predicted to be involved in fructose 2,6-bisphosphate metabolic process. Predicted to act upstream of or within fructose metabolic process and phosphorylation. Predicted to be part of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase complex. Predicted to be active in cytosol.

NR:

description
PREDICTED: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase-like

GO: NA

KEGG:

id description
K19028 PFKFB1; 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009682 True 4979 mRNA 0.49 14 44235551 44254047

Neighbor

gene id symbol gene type direction distance location
AMCG00009684 NA coding upstream 13338 44221359 ~ 44222213 (+)
AMCG00009681 NA coding upstream 30297 44199516 ~ 44205254 (+)
AMCG00009679 NA coding upstream 74312 44160582 ~ 44161239 (+)
AMCG00009673 NA coding upstream 93397 44128283 ~ 44142154 (+)
AMCG00009674 NA coding upstream 112620 44113411 ~ 44122931 (+)
AMCG00009680 NA coding downstream 11012 44265059 ~ 44281187 (+)
AMCG00009687 NA coding downstream 49179 44303226 ~ 44314149 (+)
AMCG00009686 taz coding downstream 60925 44314972 ~ 44322797 (+)
AMCG00009685 NA coding downstream 110484 44364531 ~ 44372415 (+)
AMCG00009688 NA coding downstream 119654 44373701 ~ 44381036 (+)
G58467 NA non-coding upstream 65762 44169485 ~ 44169789 (+)
G58319 NA non-coding upstream 308920 43921474 ~ 43926631 (+)
G58317 NA non-coding upstream 319791 43909588 ~ 43915760 (+)
G58304 NA non-coding upstream 359828 43873781 ~ 43875723 (+)
G58291 NA non-coding upstream 554598 43678351 ~ 43680953 (+)
G58510 NA non-coding downstream 71104 44325151 ~ 44325573 (+)
G58513 NA non-coding downstream 74224 44328271 ~ 44360062 (+)
G58527 NA non-coding downstream 159225 44413272 ~ 44483247 (+)
G58666 NA non-coding downstream 638798 44892845 ~ 44893078 (+)
G58660 NA non-coding downstream 663996 44918043 ~ 44921637 (+)
G58324 NA other upstream 299789 43932952 ~ 43935762 (+)
AMCG00009647 NA other upstream 791131 43436990 ~ 43444420 (+)
G57830 NA other upstream 2157310 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 2636427 41596229 ~ 41599124 (+)
G57604 NA other upstream 3240892 40990802 ~ 40994659 (+)
G58522 NA other downstream 132450 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 307730 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 330515 44584562 ~ 44603609 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other downstream 378703 44632750 ~ 44651967 (+)
AMCG00009706 pim1 other downstream 496129 44750176 ~ 44760058 (+)

Expression


Co-expression Network