AMCG00009683


Basic Information

Item Value
gene id AMCG00009683
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44256415 ~ 44264122 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009683
aaatatttttttctgaaaatgcttGTATCTAATACAAAGttaatgctatttattttgtttctctgacTCTTTAAAAAATCTTTAACTAAAAGCCTTTGGAGGACCCGATAGCAAATCCTTCTTCCACACATGGACCACTCTATGGTTGTCAGCTGAACTCGGTGGTTGTTAGTGACGCAATGATTGTGCGCCGTGTCGACGGGGAAGGAACTCAAATCGATCAGTTTGGATAAATAAAGCGGGAACATTGGGTTTAAAGTGTTGTGTTTAGCTCTTGGGCGACGATGTCTCAGTTTCGGAAGAGGATCTCAGCCAGTCAGAGCTCGCAGAACAAGTCACGCAAGCCGCAGACTCAGTCCCAGCCCCCGGAAGCAGACGATGACGATGAAGAAGTGTCCCTCACCCAGCCCAGCTCCTCCCAGCTCCAGAGGGGGCTGGAGCGTCTCACCCCTGCCCAAGTTGACAGCAAGATGGCTGAGGTTGTCCAGTTTATCCTGATCAAGGACCAGAAAAAGATGCCCATCAAACGAGCGGAAATTGTGAAGCAAGTCATCAAGGAATACAAGAACATCTACCCCGAGATCATGAAGCGAGTCAACAGGACTTTTGAGCAGACGTTTGGCCTCAAACTGGTGGAGATTGATGTGAAAAATCACACCTACATCCTGATCAACAAGCTCGAGCACGTGGACGGAGCCCCACTGGACCTCAACACAAGCTCACCGAAAACCGGCCTTCTGTTCGTCATCCTCGGCATCATCTTCATGAAGGGAGGAGTGGTGAAAGAGGCCGTCATCTGGAACACGCTGAAGAAGCTACGGATAGACCAAGGGGAGAAGCACGAAGACTTCGGAGACATCAAGAAGCTGCTGACGGAGGAGTTTGTGAGGCAGAAGTACCTGGAGTACAACCGCATCCCCCACACCGAGCCCCAGGAGTTTGAGTTCCACTGGGGGCTGCGGGCCGAGAAGGAGGTCTCCAAGCTCAAGGTGCTCAACTTCATCGCACAGCTGCACGATCAGCAACCTCAGACTTGGGCGTCTCAGCACAAGGAGGCGATGGAGGCCGAGGCGACGGCTGGGCCGAGAGTCTCTCTCTAGTGACCGTTGTGGCTGGAGGACTTGGAGAAGGGGGTTGTAGGGGGTTTGGGGTCAGCTGAACCAAAGAAGAATCCATGACGATCCTTGGTGCATTTGTGTGACAATGGCGTGTGCGTCTGCTAGGGCAGGCATTCGGAATATCCTTACAAACTCGTGAGATGGAAAACTGCTTCTCAAACTCGCCTCCCGGGATTGTGCGAGAAGCAGGTGCGGTGAGATTGTTGGAAAATCCTTCCCCACGGAGTGACAACGGCACTTCTGCGTTGAAGCTTGTTGATTTGATTAGGAGGAttctctgaaaaagaaagactggTCTAAACCTGAGTGTTTCATCTGGGGAATCTCCCTTGGAGCTGGTTTTCCCCTTTAGTAAGCAGTCATTGGCTTCCCAGAGTCAAGGCCCACAGACTCAGTGTGCGACTGAGCGCAGCGGACACATTGCACAGAAATATCGCTGCTGACTGAAGCGATTTAGTTCATTTAGTTAAAGAGTCTTGTTTTGGATTCACATTGTTGCATTccatacagtaaatatataaataaagatttttCAGACCTAGGAccaatactgtaaataaaattaaaatacatgttaaataagACACCTGGGAAATGCTCAATATTTTGGCTGACTCTTCTCCTTTGATGACTGGACAAACCCGGTTAACGCTGTCTTACATGAACCACTGACTCGGCTCTgcttaatattattaatgatctgttcttattttgcattttatatattttatggtgGCTTTGTACAGGTCTTTCATGCTTCAAGAGTTTGAAGGCATTGTCTTACatgagaaatgttttatattgtgtattaaattaagtaatactGACTCAA

Function

GO: NA

KEGG:

id description
K22823 NSMCE3, NSE3; non-structural maintenance of chromosomes element 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009683 True 1950 mRNA 0.47 11 44256415 44264122

Neighbor

gene id symbol gene type direction distance location
AMCG00009678 NA coding downstream 182299 44073850 ~ 44074116 (-)
AMCG00009677 NA coding downstream 191948 44051410 ~ 44064467 (-)
AMCG00009671 NA coding downstream 249612 43996712 ~ 44006803 (-)
AMCG00009664 NA coding downstream 320657 43933227 ~ 43935758 (-)
AMCG00009666 LOC105890655,LOC108438067,LOC106566835,LOC106572042,LOC105026930,LOC107558917 coding downstream 325697 43924421 ~ 43930718 (-)
AMCG00009690 gdi1,LOC105013583,LOC106567106,LOC106572620 coding upstream 20756 44284878 ~ 44293118 (-)
AMCG00009693 NA coding upstream 59863 44323985 ~ 44328354 (-)
AMCG00009692 NA coding upstream 74941 44339063 ~ 44342291 (-)
AMCG00009691 NA coding upstream 82348 44346470 ~ 44354753 (-)
AMCG00009704 plxna3,LOC107743094,LOC107601745 coding upstream 389729 44653851 ~ 44654614 (-)
G58459 NA non-coding downstream 135348 44115650 ~ 44121067 (-)
G58457 NA non-coding downstream 146132 44109969 ~ 44110283 (-)
G58456 NA non-coding downstream 146700 44109336 ~ 44109715 (-)
G58452 NA non-coding downstream 151705 44097276 ~ 44104710 (-)
G58395 NA non-coding downstream 278929 43977285 ~ 43977486 (-)
G58511 NA non-coding upstream 61035 44325157 ~ 44325573 (-)
G58548 flna,LOC107699576 non-coding upstream 216930 44481052 ~ 44526239 (-)
G58585 NA non-coding upstream 278821 44542943 ~ 44543177 (-)
G58605 NA non-coding upstream 394294 44658416 ~ 44659098 (-)
G58611 NA non-coding upstream 397759 44661881 ~ 44662333 (-)
AMCG00009672 NA other downstream 260761 43989511 ~ 43995654 (-)
G58333 NA other downstream 311118 43482421 ~ 43945297 (-)
G58025 NA other downstream 1582708 42648850 ~ 42673707 (-)
AMCG00009582 NA other downstream 2200287 42041199 ~ 42056128 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 2429481 41814559 ~ 41826934 (-)
AMCG00009697 NA other upstream 237665 44501787 ~ 44512249 (-)
G58584 NA other upstream 277772 44541894 ~ 44542809 (-)
G58589 NA other upstream 301947 44566069 ~ 44566834 (-)
G58653 NA other upstream 518796 44782918 ~ 44785134 (-)
AMCG00009739 NA other upstream 904819 45168941 ~ 45230457 (-)

Expression


Co-expression Network