AMCG00009684


Basic Information

Item Value
gene id AMCG00009684
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44221359 ~ 44222213 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009684
ATGGATCCTTTCCTCATCAACTCAACATCCGTCCTCAACACCACCAACAAAACGGCAAAGTGCAGAGATATCTGCAAGGACAGAATTGCTGGTTACATATTCTGCCTTACAGTGGAGTCTATCACTGTCATTGTGGGTTTTCCAGCCAACCTGAGGACCCTGCAGGTGCTGCGAGGGAGGGTGGCCGATTCCTCCACTTCGGATGTCTTCATTGGCAATGTTGTGGTCCTGGACACTCTGTTTTGCCTGATTATTCCTGTGACTGTCATTAACGTTTTCCACATCCAGAACCCATACATCTCAAAGGCAGTGGATTTAGTCTTCATGCTCAACGAGAACGGAGCTCTGTTGTTCCTCTGCTGTGTTTGCCTTGACCTCTACATAGCCGTGCTTCACCCCATCCGTTTCTTGCGCTACAAAGTCCTTGCCTACAGAGCTGGCTGCTCGGCTGCCATTTGGGTCATTACTGTGGTCATTTCCATCTACTTGACCTTCCTGGCAGGTAAACAGGGTTTTTACCTCACAACCAGCATCTTCTGCAGCGCCTTTGCATTGATGCTCTTCTGTAACCTCTCCATACTGTGGGCTCTTCAACAGGCTGGACCGGGTGCCCAAGAAATGCACCCCATCAAGAAAAAAGCCTTCAACACAGTTCTGACCATTTTAGTTATCCTGATATTGAACTATAGTCTACTTGTAGTGCTATTCCTTATTGACGATGTGATCCCTGGATACATATTACAGTACTACATCACTCCCATCGGCCACTCCTTCGTTACCATTAGAGTCTGCATTCAACCCCTGCTCTTTCTGTATAGCGCGGGACAAATGCATTGCTTACCAAATTCAAACTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009684 True 855 mRNA 0.47 1 44221359 44222213

Neighbor

gene id symbol gene type direction distance location
AMCG00009681 NA coding upstream 16105 44199516 ~ 44205254 (+)
AMCG00009679 NA coding upstream 60120 44160582 ~ 44161239 (+)
AMCG00009673 NA coding upstream 79205 44128283 ~ 44142154 (+)
AMCG00009674 NA coding upstream 98428 44113411 ~ 44122931 (+)
AMCG00009675 NA coding upstream 108702 44103796 ~ 44112657 (+)
AMCG00009682 si:dkey-96f10.1,LOC106609077,LOC108427753,LOC105900165,LOC108276060,LOC107704228 coding downstream 13338 44235551 ~ 44254047 (+)
AMCG00009680 NA coding downstream 42846 44265059 ~ 44281187 (+)
AMCG00009687 NA coding downstream 81013 44303226 ~ 44314149 (+)
AMCG00009686 taz coding downstream 92759 44314972 ~ 44322797 (+)
AMCG00009685 NA coding downstream 142318 44364531 ~ 44372415 (+)
G58467 NA non-coding upstream 51570 44169485 ~ 44169789 (+)
G58319 NA non-coding upstream 294728 43921474 ~ 43926631 (+)
G58317 NA non-coding upstream 305599 43909588 ~ 43915760 (+)
G58304 NA non-coding upstream 345636 43873781 ~ 43875723 (+)
G58291 NA non-coding upstream 540406 43678351 ~ 43680953 (+)
G58510 NA non-coding downstream 102938 44325151 ~ 44325573 (+)
G58513 NA non-coding downstream 106058 44328271 ~ 44360062 (+)
G58527 NA non-coding downstream 191059 44413272 ~ 44483247 (+)
G58666 NA non-coding downstream 670632 44892845 ~ 44893078 (+)
G58660 NA non-coding downstream 695830 44918043 ~ 44921637 (+)
G58324 NA other upstream 285597 43932952 ~ 43935762 (+)
AMCG00009647 NA other upstream 776939 43436990 ~ 43444420 (+)
G57830 NA other upstream 2143118 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 2622235 41596229 ~ 41599124 (+)
G57604 NA other upstream 3226700 40990802 ~ 40994659 (+)
G58522 NA other downstream 164284 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 339564 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 362349 44584562 ~ 44603609 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other downstream 410537 44632750 ~ 44651967 (+)
AMCG00009706 pim1 other downstream 527963 44750176 ~ 44760058 (+)

Expression


Co-expression Network