AMCG00009692


Basic Information

Item Value
gene id AMCG00009692
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44339063 ~ 44342291 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009692
atggTATGTCGCGACGCGTGTGTGAGACACTTGTCTATTGTAGTCTCTAGTAAGCAGCAGCCAGTAGACCAGTTTGCTGCTTGTGGTGAGGAAGAGGCAATACCAAGCGCCAGCCATGAGCCCATAACTTCAGATTGGACAGATCTTCATACCAGAGACTGTAAAGTCTGTCCTGTGGACTGGGAGATCAACGGTGGAAAGTGCTACTTCTTCTCCACTGATGAAAAGAACTGGGATGAGAGTCGTGATGACTGTGTCAGAAGGGGTGGACACTTGGCCATTATAGGCACTGAGGAGGAGCAGAGGTATAAAGTCATAACTATCTACACGTGTagATTCTGGGGCACGAAACAGACAGGTAGAGAAGAGCCTGATAACTGGACAGGAGACAATCCTTTAGGGGAGAACTGTGcatgtatgaatacattcatttggTTTGATGACTCTTGCACCAAAGCTTACAAACGAATCTGTGAAACAAGAGCACTGGAAAAACCCAAATAA

Function

GO:

id name namespace
GO:0072329 monocarboxylic acid catabolic process biological_process
GO:0017001 antibiotic catabolic process biological_process
GO:0019541 propionate metabolic process biological_process
GO:0019543 propionate catabolic process biological_process
GO:0009062 fatty acid catabolic process biological_process
GO:0019626 short-chain fatty acid catabolic process biological_process
GO:0046459 short-chain fatty acid metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009692 True 504 mRNA 0.46 4 44339063 44342291

Neighbor

gene id symbol gene type direction distance location
AMCG00009693 NA coding downstream 10709 44323985 ~ 44328354 (-)
AMCG00009690 gdi1,LOC105013583,LOC106567106,LOC106572620 coding downstream 45945 44284878 ~ 44293118 (-)
AMCG00009683 NA coding downstream 74941 44256415 ~ 44264122 (-)
AMCG00009678 NA coding downstream 264947 44073850 ~ 44074116 (-)
AMCG00009677 NA coding downstream 274596 44051410 ~ 44064467 (-)
AMCG00009691 NA coding upstream 4179 44346470 ~ 44354753 (-)
AMCG00009704 plxna3,LOC107743094,LOC107601745 coding upstream 311560 44653851 ~ 44654614 (-)
AMCG00009705 NA coding upstream 313753 44656044 ~ 44657724 (-)
AMCG00009710 NA coding upstream 340373 44682664 ~ 44693533 (-)
AMCG00009713 LOC107601746 coding upstream 446839 44789130 ~ 44808487 (-)
G58511 NA non-coding downstream 13490 44325157 ~ 44325573 (-)
G58459 NA non-coding downstream 217996 44115650 ~ 44121067 (-)
G58457 NA non-coding downstream 228780 44109969 ~ 44110283 (-)
G58456 NA non-coding downstream 229348 44109336 ~ 44109715 (-)
G58452 NA non-coding downstream 234353 44097276 ~ 44104710 (-)
G58548 flna,LOC107699576 non-coding upstream 138761 44481052 ~ 44526239 (-)
G58585 NA non-coding upstream 200652 44542943 ~ 44543177 (-)
G58605 NA non-coding upstream 316125 44658416 ~ 44659098 (-)
G58611 NA non-coding upstream 319590 44661881 ~ 44662333 (-)
G58612 NA non-coding upstream 322447 44664738 ~ 44664945 (-)
AMCG00009672 NA other downstream 343409 43989511 ~ 43995654 (-)
G58333 NA other downstream 393766 43482421 ~ 43945297 (-)
G58025 NA other downstream 1665356 42648850 ~ 42673707 (-)
AMCG00009582 NA other downstream 2282935 42041199 ~ 42056128 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 2512129 41814559 ~ 41826934 (-)
AMCG00009697 NA other upstream 159496 44501787 ~ 44512249 (-)
G58584 NA other upstream 199603 44541894 ~ 44542809 (-)
G58589 NA other upstream 223778 44566069 ~ 44566834 (-)
G58653 NA other upstream 440627 44782918 ~ 44785134 (-)
AMCG00009739 NA other upstream 826650 45168941 ~ 45230457 (-)

Expression


Co-expression Network