AMCG00009697


Basic Information

Item Value
gene id AMCG00009697
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44501787 ~ 44512249 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009697
ATGTTGCCAGAGACCGGCGTCCTGATTCTGCTGTCCCTTGCCAATGGCACTCTTATCAGACTGGTGAACGGGTACAACAACTGCTCCGGCACGGTGGAGGTCTATTACAACGGACAGTGGGGGACGGTGTGCGACGACGACTGGGAGTTGGATGATGCACAAGTGGTGTGCCGGGAGCTGGGCTGTGGGGTCGCCCTGTCAGCTACGACCCATGCCCAGTTTGGACAGGGCTCGGGCAATATCGCTCTCGATGACGTGGCCTGTGTCGGGACAGAAACGTCTCTCCTGAACTGCCCCGCAAACCTGGGGAGCAACAACTGCGATCACTCGGAAGATGCCGGCGTCGTCTGCTCAGAGGGACCGAATGTTAGGCTGGTCAGTGGGAACAACAACTGCTCTGGCCGAGTGGAAGTCTCTTACAACGGTCAGTGGGGGACGGTGTGCGACGACGGCTGGGACACAAGGGACGCCCAGGTGGTCTGTAGAGAGCTGGGCTGCGGCGACGCTTTGTCCGCTCCCATGAAAGCCACGTTCGGGGGAGGGACCGGCCCAATTCAGTTAAATGACGTCCACTGCACCGGGAACGAGATGTCCCTACTGAACTGCCTGGCCAGCAGACGGACAGTTCGCAACTGCGGCCACAACGAAGACGCCAGCGCCATCTGTTCAGGTACAGGGCTGCCCGGCTACCCAGGCGACAGGTGCAATGGCAGAGTGGAGGTGTTCCACGCCGGGCTGTGGGGCACGGTCTGTGACCACGGCTGGGACCTGAACGCGGTGCGGGTGGTGTGCAGGGAGCTGGGCTGCGGCCGCGCTATCACACAACTCGGAGAGGCCACCTACGGGCAAGGCTCGGGCCGCATCTGGCTGGACGACGTGGCCTGCAGCGGCTCGGAGAGCACCCTGCTGGACTGCAGCCACAGAGCCTTCGGGGAACATAACTGCCAGCACAGTGAACGCCTGGTGCTGTGA
>TU73231
CGGGCACACAGCTCATAGTTCAGAGTGATTAAGTCACATCTGACTTATTCATACCtctgaatattgttttcatgGTAAAGGCTAATTGACAGCTGTGAGAAATATATGCAGTTGTGTGATAGTGGGCTCCGTCGTTTTCTTTATAAGATGTTGCCAGAGACCGGCGTCCTGATTCTGCTGTCCCTTGCCAGTCTTCTTATGGGCACAGCAGGAAACAATGGCACTCTTATCAGACTGGTGAACGGGTACAACAACTGCTCCGGCACGGTGGAGGTCTATTACAACGGACAGTGGGGGACGGTGTGCGACGACGACTGGGAGTTGGATGATGCACAAGTGGTGTGCCGGGAGCTGGGCTGTGGGGTCGCCCTGTCAGCTACGACCCATGCCCAGTTTGGACAGGGCTCGGGCAATATCGCTCTCGATGACGTGGCCTGTGTCGGGACAGAAACGTCTCTCCTGAACTGCCCCGCAAACCTGGGGAGCAACAACTGCGATCACTCGGAAGATGCCGGCGTCGTCTGCTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009697 True 972 mRNA 0.62 5 44501787 44512102
TU73231 False 529 TUCP 0.53 3 44508253 44512249

Neighbor

gene id symbol gene type direction distance location
AMCG00009691 NA coding downstream 147034 44346470 ~ 44354753 (-)
AMCG00009692 NA coding downstream 159496 44339063 ~ 44342291 (-)
AMCG00009693 NA coding downstream 173433 44323985 ~ 44328354 (-)
AMCG00009690 gdi1,LOC105013583,LOC106567106,LOC106572620 coding downstream 208669 44284878 ~ 44293118 (-)
AMCG00009683 NA coding downstream 237665 44256415 ~ 44264122 (-)
AMCG00009704 plxna3,LOC107743094,LOC107601745 coding upstream 141602 44653851 ~ 44654614 (-)
AMCG00009705 NA coding upstream 143795 44656044 ~ 44657724 (-)
AMCG00009710 NA coding upstream 170415 44682664 ~ 44693533 (-)
AMCG00009713 LOC107601746 coding upstream 276881 44789130 ~ 44808487 (-)
AMCG00009718 LOC106566500,LOC105009055,LOC102795717,LOC107584920,LOC107735484 coding upstream 409840 44922089 ~ 44927038 (-)
G58511 NA non-coding downstream 176214 44325157 ~ 44325573 (-)
G58459 NA non-coding downstream 380720 44115650 ~ 44121067 (-)
G58457 NA non-coding downstream 391504 44109969 ~ 44110283 (-)
G58456 NA non-coding downstream 392072 44109336 ~ 44109715 (-)
G58452 NA non-coding downstream 397077 44097276 ~ 44104710 (-)
G58585 NA non-coding upstream 30694 44542943 ~ 44543177 (-)
G58605 NA non-coding upstream 146167 44658416 ~ 44659098 (-)
G58611 NA non-coding upstream 149632 44661881 ~ 44662333 (-)
G58612 NA non-coding upstream 152489 44664738 ~ 44664945 (-)
G58613 NA non-coding upstream 152873 44665122 ~ 44665331 (-)
AMCG00009672 NA other downstream 506133 43989511 ~ 43995654 (-)
G58333 NA other downstream 556490 43482421 ~ 43945297 (-)
G58025 NA other downstream 1828080 42648850 ~ 42673707 (-)
AMCG00009582 NA other downstream 2445659 42041199 ~ 42056128 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 2674853 41814559 ~ 41826934 (-)
G58584 NA other upstream 29645 44541894 ~ 44542809 (-)
G58589 NA other upstream 53820 44566069 ~ 44566834 (-)
G58653 NA other upstream 270669 44782918 ~ 44785134 (-)
AMCG00009739 NA other upstream 656692 45168941 ~ 45230457 (-)
AMCG00009742 NA other upstream 739388 45251637 ~ 45277597 (-)

Expression


Co-expression Network