AMCG00009698



Basic Information


Item Value
gene id AMCG00009698
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44439574 ~ 44442056 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00009698
atgagcagcccACACCCCCGCCTGAACCAGTCGAGCGCTCCGAGCTCCGCCGCCTCGAACGCAGCAGCCCTAGCCGACAAGGACGCAGACATGCCCGCCACGGAGAAGGACCTGGCCGAGGATGCGCCGTGGAAGAAGATCCAGCAGAACACGTTCACCCGCTGGTGCAACGAGCACCTCAAGTGCGTCAACAAGCGCATCGCCAACCTGCAGACCGACCTGAGCGACGGGCTGCGGCTCATCGGCCTGCTGGAGGTCCTGAGCCAGAAGAAGATGTTCCGCAAGTACAACCAGCGGCCCACCTTCAGGCAGATGCAGCTGGAGAACGTGTCGGTGGCCCTGGAGTTCCTGGACAAGGAGAACATCAAGCTGGTGTCTATCGCCATGGCCCAACGGAGATCGAGCGACCTGCTCCGCTCATCCCAACGAGGGCACCGTGCCGTGCAGCAGGGAATGGCGTTTTCGGTTGCTTGTATTCCCGCACGTTCACAGTCCTGGGATGGCGGGGGCCGTGCCCGTGTGCTGCAGGGAGCGTCGCCGGGTCTCGCTTCCCCTTTTGGCATCTGA

Function


GO: NA

KEGG:

id description
ko00310 Lysine degradation

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00009698 True 567 mRNA 0.63 2 44439574 44442056

Neighbor


gene id symbol gene type direction distance location
AMCG00009689 NA coding upstream 53402 44382557 ~ 44386172 (+)
AMCG00009688 NA coding upstream 58538 44373701 ~ 44381036 (+)
AMCG00009685 NA coding upstream 67159 44364531 ~ 44372415 (+)
AMCG00009686 taz coding upstream 116777 44314972 ~ 44322797 (+)
AMCG00009687 NA coding upstream 125425 44303226 ~ 44314149 (+)
AMCG00009696 flna,LOC108436314,LOC107712729,LOC101154674,LOC107570276 coding downstream 8047 44450103 ~ 44482061 (+)
AMCG00009695 NA coding downstream 41911 44483967 ~ 44490079 (+)
AMCG00009699 NA coding downstream 50639 44492695 ~ 44502439 (+)
AMCG00009703 plxna3 coding downstream 199894 44641950 ~ 44642771 (+)
AMCG00009702 NA coding downstream 205960 44648016 ~ 44653748 (+)
G58513 NA non-coding upstream 79512 44328271 ~ 44360062 (+)
G58510 NA non-coding upstream 114001 44325151 ~ 44325573 (+)
G58467 NA non-coding upstream 269785 44169485 ~ 44169789 (+)
G58319 NA non-coding upstream 512943 43921474 ~ 43926631 (+)
G58317 NA non-coding upstream 523814 43909588 ~ 43915760 (+)
G58666 NA non-coding downstream 450789 44892845 ~ 44893078 (+)
G58660 NA non-coding downstream 475987 44918043 ~ 44921637 (+)
G58668 NA non-coding downstream 480028 44922084 ~ 44923700 (+)
G58776 NA non-coding downstream 701119 45143175 ~ 45143472 (+)
G58792 NA non-coding downstream 752467 45194523 ~ 45198264 (+)
G58522 NA other upstream 32006 44386497 ~ 44407568 (+)
G58324 NA other upstream 503812 43932952 ~ 43935762 (+)
AMCG00009647 NA other upstream 995154 43436990 ~ 43444420 (+)
G57830 NA other upstream 2361333 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 2840450 41596229 ~ 41599124 (+)
AMCG00009694 LOC103385381 other downstream 119721 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 142506 44584562 ~ 44603609 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other downstream 190694 44632750 ~ 44651967 (+)
AMCG00009706 pim1 other downstream 308120 44750176 ~ 44760058 (+)
G58747 NA other downstream 614009 45056065 ~ 45057874 (+)

Expression



Co-expression Network


Homologous


species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_05902661_05905496 NA coding CI01000001 null 5902370 ~ 5905786 (+)