Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00009717 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 44969962 ~ 44976755 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0042135 | neurotransmitter catabolic process | biological_process |
| GO:0032259 | methylation | biological_process |
| GO:0006584 | catecholamine metabolic process | biological_process |
| GO:0016206 | catechol O-methyltransferase activity | molecular_function |
| GO:0000287 | magnesium ion binding | molecular_function |
| id | description |
|---|---|
| K00545 | COMT; catechol O-methyltransferase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00009717 | True | 1348 | mRNA | 0.61 | 6 | 44969962 | 44976755 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009718 | LOC106566500,LOC105009055,LOC102795717,LOC107584920,LOC107735484 | coding | downstream | 42924 | 44922089 ~ 44927038 (-) |
| AMCG00009713 | LOC107601746 | coding | downstream | 161475 | 44789130 ~ 44808487 (-) |
| AMCG00009710 | NA | coding | downstream | 276429 | 44682664 ~ 44693533 (-) |
| AMCG00009705 | NA | coding | downstream | 312238 | 44656044 ~ 44657724 (-) |
| AMCG00009704 | plxna3,LOC107743094,LOC107601745 | coding | downstream | 315348 | 44653851 ~ 44654614 (-) |
| AMCG00009723 | NA | coding | upstream | 54162 | 45030917 ~ 45032715 (-) |
| AMCG00009725 | LOC105419832 | coding | upstream | 66091 | 45042846 ~ 45046433 (-) |
| AMCG00009724 | LOC108265805,LOC108437579 | coding | upstream | 80919 | 45057674 ~ 45087487 (-) |
| AMCG00009732 | NA | coding | upstream | 136678 | 45113433 ~ 45114885 (-) |
| AMCG00009733 | NA | coding | upstream | 143556 | 45120311 ~ 45124004 (-) |
| G58707 | NA | non-coding | downstream | 53073 | 44916631 ~ 44916889 (-) |
| G58699 | NA | non-coding | downstream | 76879 | 44892792 ~ 44893083 (-) |
| G58654 | NA | non-coding | downstream | 183190 | 44785604 ~ 44786772 (-) |
| G58613 | NA | non-coding | downstream | 304631 | 44665122 ~ 44665331 (-) |
| G58612 | NA | non-coding | downstream | 305017 | 44664738 ~ 44664945 (-) |
| G58724 | NA | non-coding | upstream | 21277 | 44998032 ~ 45000234 (-) |
| G58761 | NA | non-coding | upstream | 113462 | 45090217 ~ 45119224 (-) |
| G58808 | NA | non-coding | upstream | 207606 | 45184361 ~ 45250020 (-) |
| G58807 | NA | non-coding | upstream | 242874 | 45219629 ~ 45241933 (-) |
| G58901 | NA | non-coding | upstream | 355460 | 45332215 ~ 45336884 (-) |
| G58653 | NA | other | downstream | 184828 | 44782918 ~ 44785134 (-) |
| G58589 | NA | other | downstream | 403128 | 44566069 ~ 44566834 (-) |
| G58584 | NA | other | downstream | 427153 | 44541894 ~ 44542809 (-) |
| AMCG00009697 | NA | other | downstream | 457713 | 44501787 ~ 44512249 (-) |
| AMCG00009672 | NA | other | downstream | 974308 | 43989511 ~ 43995654 (-) |
| AMCG00009739 | NA | other | upstream | 192186 | 45168941 ~ 45230457 (-) |
| AMCG00009742 | NA | other | upstream | 274882 | 45251637 ~ 45277597 (-) |
| AMCG00009748 | NA | other | upstream | 344002 | 45320757 ~ 45326055 (-) |
| AMCG00009755 | NA | other | upstream | 481988 | 45458743 ~ 45465377 (-) |
| AMCG00009766 | srpk3,LOC107601770,LOC107674354 | other | upstream | 660992 | 45637747 ~ 45642744 (-) |
