AMCG00009719


Basic Information

Item Value
gene id AMCG00009719
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44966879 ~ 44969079 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009719
ATGTCGGAGGAGGAGAGGATGTCTAAAGACAGGGAACAGGCTGGAGAGGGGGAGGATGTGGTCAGCCCTGGCGCTggaatagaagaagaaaaagaggaggagaaagagaggatgCGTGGAGTGAGGGTGGACTTTGTCAGCCATGAAGCTGGAgtagaagaggaggaggaggaagagaggatgTGTGAAGGCTGGGAGGAgggtggagagggggaggacGTGGTCAGCCCTGACGCTGGAGGAGAagatggaggagaagaagatgatgataatgcagatgaagaggaggaggaggggactGCAGACGGAGGACAACAACATGTCGGTGACGATGGAGAGACGCAGGCAGCAGCCAAGGCTCCCCCGGGGAAGAAGACGGTCCCTGGGATCGTCTACCTGGGACACATCCCCCCCCGACTGAGGCCCAAGCACGTGCGCAACATGCTGGGCGTCCACGGAGAGATCGGCCGGATCTTCCTGCAGCCGGAGGGTGAGAgcgctggggtggggggtggcaaGCCTGGGGACCCTGAGACACTGAaCCACTCCGTGCgcaggaagaagaagaaggcgGGCTCGAACGCGCGCTCGTTCACCGAGGGCTGGGTGGAGTTCCGGGACAAGCGGGTGGCCAAGCGGGTGGCGCTCAGCCTGCACAGCGCGCCCATGGGCACCCGCAAGAGGAGCCGGTTCCACGACGACCTGTGTGTTTGGCTGGCACTGCTCTGGAGCTCACTGCGCCTGCGCACAGAGATCTCCCAGGCCAAGAgggagaccagcttctacctgGCCAACGTGGAGCGCAGCCGCGACCTGGACCGGCTCCGCaagaggagggagaaggagggccGCGGTGGGCCGGACAAGACCTGGGACTTCACCCAGCGGCGCACCGAGGACGAGATCCGGCAGCGGCGGCTCCAGGCCCCGGGCCCGGGCCGCTCCAAGAAGGAGCAGCGGAAGGCGCTGGAGAAGGCACAGCTCATCCAGGAGAAGGCCCAGTCCAACGTGTCCCTGCTGGCCAAGATCTTCAACAGCAGCAAGGCTGGCCAGGACAGCTGA

Function

GO: NA

KEGG:

id description
K14785 ESF2, ABT1; ESF2/ABP1 family protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009719 True 1062 mRNA 0.64 4 44966879 44969079

Neighbor

gene id symbol gene type direction distance location
AMCG00009716 elk1,LOC103384389,LOC102208123,LOC100703163 coding upstream 4595 44950673 ~ 44962284 (+)
AMCG00009715 NA coding upstream 33065 44927867 ~ 44933814 (+)
AMCG00009714 usp11 coding upstream 50036 44901426 ~ 44916843 (+)
AMCG00009712 LOC107584919,LOC106904750,LOC106522891 coding upstream 85154 44856527 ~ 44881725 (+)
AMCG00009709 NA coding upstream 185911 44768874 ~ 44780968 (+)
AMCG00009722 NA coding downstream 6581 44975660 ~ 44984837 (+)
AMCG00009720 NA coding downstream 20194 44989273 ~ 44998008 (+)
AMCG00009726 NA coding downstream 32059 45001138 ~ 45003572 (+)
AMCG00009721 NA coding downstream 36090 45005169 ~ 45031780 (+)
AMCG00009730 magix,LOC101063258,LOC108228699 coding downstream 120124 45089203 ~ 45093238 (+)
G58668 NA non-coding upstream 43179 44922084 ~ 44923700 (+)
G58660 NA non-coding upstream 45242 44918043 ~ 44921637 (+)
G58666 NA non-coding upstream 73801 44892845 ~ 44893078 (+)
G58527 NA non-coding upstream 483632 44413272 ~ 44483247 (+)
G58513 NA non-coding upstream 606817 44328271 ~ 44360062 (+)
G58776 NA non-coding downstream 174096 45143175 ~ 45143472 (+)
G58792 NA non-coding downstream 225444 45194523 ~ 45198264 (+)
G58825 NA non-coding downstream 297860 45266939 ~ 45275033 (+)
G58830 NA non-coding downstream 307409 45276488 ~ 45277596 (+)
G58822 NA non-coding downstream 360705 45329784 ~ 45332856 (+)
AMCG00009706 pim1 other upstream 206821 44750176 ~ 44760058 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other upstream 314912 44632750 ~ 44651967 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other upstream 363270 44584562 ~ 44603609 (+)
AMCG00009694 LOC103385381 other upstream 396348 44561777 ~ 44570531 (+)
G58522 NA other upstream 559311 44386497 ~ 44407568 (+)
G58747 NA other downstream 86986 45056065 ~ 45057874 (+)
AMCG00009761 NA other downstream 538688 45507767 ~ 45511037 (+)
AMCG00009759 NA other downstream 590898 45559977 ~ 45572255 (+)
AMCG00009760 NA other downstream 604191 45573270 ~ 45575964 (+)
AMCG00009758 abcd1,LOC107701814,LOC107743108,LOC108440542,LOC107674359,LOC107552221,LOC107727428 other downstream 607460 45576539 ~ 45584727 (+)

Expression


Co-expression Network