AMCG00009722


Basic Information

Item Value
gene id AMCG00009722
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44975660 ~ 44984837 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009722
ATGCATGCCTGCAGCACCCCCCCGAATCCAGCTGCAGAGCGCCGTGCCGAAGAGCACGAACGGCAAGGGGGGCCCAATTTCGCGATGCTGCTCATGAAAGCCGACCTGGCCGTATACACGCGTGTGCCACGTCCTGGATCGACGCATCTCTCCCGGGATGATGCGAGTCCTGCTTTCGTGCGGGGCTGCTCCGGCCGACTGCCCCCCGCCCGCCCCCCGCAAGCCCTGACAATATGGTATGCCCCTGGTTTCTTGAATGGAATTCGGCCCGTACCAAGATGGCACAGCCAGGAGGAAAAGAAGGGGGGATGGAAAACGCAACCCGGGGAGAAAGAGCACTTAAGAGAGCAGTGGACGGGTCTGCGCAGAATGGCATGCTTCGGCCAGTGCAGgaaaaaaaaagaagggaaaagcAGCGCACAGCCGTGGCATGGCGGGGGTCGGGCAGCTCTGCGTGCCGTCTGCCGGGCTGACACACCATGGCTGAAGATTACTGGGAGCAGACGGCGGCCCCGGGACACTACTGACACGGCACAGCGAGGGCACACGGCGTCCCAGGCGGGGGTAAGCGCTCCGGTATGCGGCGTCCGAGGCTGCGTTTCGGCACCTTCCCGGCGGTACCGTCGTGTGTTTTCCACGGACACGCACGGCTGCAGTGTGTGCCGCAACAGCGCCGGAGATGCCTGCCTGTGCCGTACAGCAGGTGTACGACTCACGGCCCACAGCAGCATCTTGGCACCGTGCGTGCATGAGTGGGACTGTGCCTCGGACTGTCGGGGAGCCGTGGGCAGTGCCGTGGCAGAGGTTAAAGTTAAGATGATACATCGAGAGACTGTCTGCTCAGAGTCAGTGATCTGTGTGTCAGAAAACCGGCAAAATTCCACAGACAGTGCCGGCCTCTCCGCTGCCACCCGGCGCCGCACATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009722 True 927 mRNA 0.63 6 44975660 44984837

Neighbor

gene id symbol gene type direction distance location
AMCG00009719 NA coding upstream 6581 44966879 ~ 44969079 (+)
AMCG00009716 elk1,LOC103384389,LOC102208123,LOC100703163 coding upstream 13376 44950673 ~ 44962284 (+)
AMCG00009715 NA coding upstream 41846 44927867 ~ 44933814 (+)
AMCG00009714 usp11 coding upstream 58817 44901426 ~ 44916843 (+)
AMCG00009712 LOC107584919,LOC106904750,LOC106522891 coding upstream 93935 44856527 ~ 44881725 (+)
AMCG00009720 NA coding downstream 4436 44989273 ~ 44998008 (+)
AMCG00009726 NA coding downstream 16301 45001138 ~ 45003572 (+)
AMCG00009721 NA coding downstream 20332 45005169 ~ 45031780 (+)
AMCG00009730 magix,LOC101063258,LOC108228699 coding downstream 104366 45089203 ~ 45093238 (+)
AMCG00009728 NA coding downstream 120699 45105536 ~ 45111832 (+)
G58668 NA non-coding upstream 51960 44922084 ~ 44923700 (+)
G58660 NA non-coding upstream 54023 44918043 ~ 44921637 (+)
G58666 NA non-coding upstream 82582 44892845 ~ 44893078 (+)
G58527 NA non-coding upstream 492413 44413272 ~ 44483247 (+)
G58513 NA non-coding upstream 615598 44328271 ~ 44360062 (+)
G58776 NA non-coding downstream 158338 45143175 ~ 45143472 (+)
G58792 NA non-coding downstream 209686 45194523 ~ 45198264 (+)
G58825 NA non-coding downstream 282102 45266939 ~ 45275033 (+)
G58830 NA non-coding downstream 291651 45276488 ~ 45277596 (+)
G58822 NA non-coding downstream 344947 45329784 ~ 45332856 (+)
AMCG00009706 pim1 other upstream 215602 44750176 ~ 44760058 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other upstream 323693 44632750 ~ 44651967 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other upstream 372051 44584562 ~ 44603609 (+)
AMCG00009694 LOC103385381 other upstream 405129 44561777 ~ 44570531 (+)
G58522 NA other upstream 568092 44386497 ~ 44407568 (+)
G58747 NA other downstream 71228 45056065 ~ 45057874 (+)
AMCG00009761 NA other downstream 522930 45507767 ~ 45511037 (+)
AMCG00009759 NA other downstream 575140 45559977 ~ 45572255 (+)
AMCG00009760 NA other downstream 588433 45573270 ~ 45575964 (+)
AMCG00009758 abcd1,LOC107701814,LOC107743108,LOC108440542,LOC107674359,LOC107552221,LOC107727428 other downstream 591702 45576539 ~ 45584727 (+)

Expression


Co-expression Network